2026-05-01T04:21:38.902703Z 00O Running with gitlab-runner 18.10.0~pre.705.ge11dde90 (e11dde90) 2026-05-01T04:21:38.902717Z 00O  on blue-2.saas-linux-medium-amd64.runners-manager.gitlab.com/default ZQ74L_riD, system ID: s_805fb2e5035f 2026-05-01T04:21:38.902726Z 00O  feature flags: FF_USE_GIT_PROACTIVE_AUTH:true 2026-05-01T04:21:38.902752Z 00O Resolving secrets 2026-05-01T04:21:38.902931Z 00O section_start:1777609298:prepare_executor 2026-05-01T04:21:38.902934Z 00O+Preparing the "docker+machine" executor 2026-05-01T04:21:39.027488Z 00O Using Docker executor with image registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 ... 2026-05-01T04:21:43.003668Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 2026-05-01T04:21:43.004134Z 00O Authenticating with credentials from job payload (GitLab Registry) 2026-05-01T04:21:43.004142Z 00O Pulling docker image registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 ... 2026-05-01T04:22:10.916518Z 00O Using docker image sha256:8c79d964faeee45e329d6365dabcd1983cd15a93ff3fb807cb69cec3a944d96f for registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 with digest registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0@sha256:5ed0b6888446d55b932458648141f8a7489cf217c0d545d248c18405dd4dd118 ... 2026-05-01T04:22:10.916585Z 00O section_end:1777609330:prepare_executor 2026-05-01T04:22:10.916587Z 00O+section_start:1777609330:prepare_script 2026-05-01T04:22:10.916671Z 00O+Preparing environment 2026-05-01T04:22:10.917412Z 00O Using effective pull policy of [always] for container sha256:e28897862d372f74967dd8c3e47d65cac3964df854666d21683cee812fb5300c 2026-05-01T04:22:20.451988Z 01O Running on runner-zq74lrid-project-3622566-concurrent-0 via runner-zq74lrid-s-l-m-amd64-1777609245-b51d72b9... 2026-05-01T04:22:20.631612Z 00O section_end:1777609340:prepare_script 2026-05-01T04:22:20.631617Z 00O+section_start:1777609340:get_sources 2026-05-01T04:22:20.632128Z 00O+Getting source from Git repository 2026-05-01T04:22:21.001251Z 01O Gitaly correlation ID: 1edd5404489d4c848654547f77450a5a 2026-05-01T04:22:21.007520Z 01O Fetching changes... 2026-05-01T04:22:21.010885Z 01O Initialized empty Git repository in /builds/Rdatatable/data.table/.git/ 2026-05-01T04:22:21.013160Z 01O Created fresh repository. 2026-05-01T04:22:26.599545Z 01O Checking out 289a1ec3 as detached HEAD (ref is master)... 2026-05-01T04:22:26.786217Z 01O 2026-05-01T04:22:26.786222Z 01O Skipping Git submodules setup 2026-05-01T04:22:26.786222Z 01O $ git remote set-url origin "${CI_REPOSITORY_URL}" || echo 'Not a git repository; skipping' 2026-05-01T04:22:27.025593Z 00O section_end:1777609347:get_sources 2026-05-01T04:22:27.025597Z 00O+section_start:1777609347:download_artifacts 2026-05-01T04:22:27.026268Z 00O+Downloading artifacts 2026-05-01T04:22:27.436040Z 01O Downloading artifacts for build (14173257970)... 2026-05-01T04:22:27.732582Z 01E Downloading artifacts from coordinator... ok  correlation_id=e6bba25bb663477ca2e6a9867bd7fd2e host=storage.googleapis.com id=14173257970 responseStatus=200 OK token=6e_LrE6Cy 2026-05-01T04:22:27.750817Z 01O Downloading artifacts for mirror-packages (14173257969)... 2026-05-01T04:22:28.896343Z 01E Downloading artifacts from coordinator... ok  correlation_id=e74db72479e6461fbf682db2a2348006 host=storage.googleapis.com id=14173257969 responseStatus=200 OK token=6e_LrE6Cy 2026-05-01T04:22:29.925074Z 00O section_end:1777609349:download_artifacts 2026-05-01T04:22:29.925082Z 00O+section_start:1777609349:step_script 2026-05-01T04:22:29.925441Z 00O+Executing "step_script" stage of the job script 2026-05-01T04:22:29.925458Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 2026-05-01T04:22:29.926478Z 00O Using docker image sha256:8c79d964faeee45e329d6365dabcd1983cd15a93ff3fb807cb69cec3a944d96f for registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 with digest registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0@sha256:5ed0b6888446d55b932458648141f8a7489cf217c0d545d248c18405dd4dd118 ... 2026-05-01T04:22:30.282843Z 01O $ cp $(ls -1t bus/build/data.table_*.tar.gz | head -n 1) . 2026-05-01T04:22:30.292628Z 01O $ mkdir -p ~/.R 2026-05-01T04:22:30.293852Z 01O $ Rscript -e 'source(".ci/ci.R"); install.packages(dcf.dependencies("DESCRIPTION", which="all"), repos=file.path("file:", normalizePath("bus/mirror-packages/cran", mustWork=FALSE)), quiet=TRUE)' 2026-05-01T04:22:30.474308Z 01E also installing the dependencies ‘bit’, ‘R.oo’, ‘R.methodsS3’, ‘commonmark’ 2026-05-01T04:22:30.474310Z 01E 2026-05-01T04:23:05.698696Z 01E Updating HTML index of packages in '.Library' 2026-05-01T04:23:05.699613Z 01E Making 'packages.html' ... done 2026-05-01T04:23:05.715222Z 01E Warning message: 2026-05-01T04:23:05.715223Z 01E packages ‘xts’, ‘knitr’ are not available (for R version 3.5.0) 2026-05-01T04:23:05.724038Z 01O $ R CMD check --no-manual --no-build-vignettes --ignore-vignettes $(ls -1t data.table_*.tar.gz | head -n 1) 2026-05-01T04:23:05.875672Z 01O * using log directory ‘/builds/Rdatatable/data.table/data.table.Rcheck’ 2026-05-01T04:23:05.875859Z 01O * using R version 3.5.0 (2018-04-23) 2026-05-01T04:23:05.876177Z 01O * using platform: x86_64-pc-linux-gnu (64-bit) 2026-05-01T04:23:05.876412Z 01O * using session charset: UTF-8 2026-05-01T04:23:06.442546Z 01O * using options ‘--no-manual --ignore-vignettes’ 2026-05-01T04:23:06.442842Z 01O * checking for file ‘data.table/DESCRIPTION’ ... OK 2026-05-01T04:23:06.445430Z 01O * this is package ‘data.table’ version ‘1.18.99’ 2026-05-01T04:23:06.445669Z 01O * package encoding: UTF-8 2026-05-01T04:23:06.445935Z 01O * checking package namespace information ... OK 2026-05-01T04:23:06.451493Z 01O * checking package dependencies ... NOTE 2026-05-01T04:23:12.163609Z 01O Package suggested but not available for checking: ‘xts’ 2026-05-01T04:23:12.163611Z 01O 2026-05-01T04:23:12.163612Z 01O Package which this enhances but not available for checking: ‘knitr’ 2026-05-01T04:23:12.163618Z 01O * checking if this is a source package ... OK 2026-05-01T04:23:12.167108Z 01O * checking if there is a namespace ... OK 2026-05-01T04:23:12.175790Z 01O * checking for executable files ... OK 2026-05-01T04:23:13.145804Z 01O * checking for hidden files and directories ... OK 2026-05-01T04:23:13.149641Z 01O * checking for portable file names ... OK 2026-05-01T04:23:13.157035Z 01O * checking for sufficient/correct file permissions ... OK 2026-05-01T04:23:13.159322Z 01O * checking whether package ‘data.table’ can be installed ... OK 2026-05-01T04:23:30.322899Z 01O * checking installed package size ... NOTE 2026-05-01T04:23:30.331368Z 01O installed size is 8.5Mb 2026-05-01T04:23:30.332192Z 01O sub-directories of 1Mb or more: 2026-05-01T04:23:30.332784Z 01O doc 1.1Mb 2026-05-01T04:23:30.332785Z 01O libs 2.1Mb 2026-05-01T04:23:30.332786Z 01O po 1.7Mb 2026-05-01T04:23:30.332786Z 01O tests 2.2Mb 2026-05-01T04:23:30.333080Z 01O * checking package directory ... OK 2026-05-01T04:23:30.333527Z 01O * checking DESCRIPTION meta-information ... OK 2026-05-01T04:23:30.527261Z 01O * checking top-level files ... OK 2026-05-01T04:23:30.527718Z 01O * checking for left-over files ... OK 2026-05-01T04:23:30.530393Z 01O * checking index information ... OK 2026-05-01T04:23:30.690849Z 01O * checking package subdirectories ... OK 2026-05-01T04:23:30.890971Z 01O * checking R files for non-ASCII characters ... OK 2026-05-01T04:23:30.941003Z 01O * checking R files for syntax errors ... OK 2026-05-01T04:23:31.044783Z 01O * checking whether the package can be loaded ... OK 2026-05-01T04:23:31.218128Z 01O * checking whether the package can be loaded with stated dependencies ... OK 2026-05-01T04:23:31.359518Z 01O * checking whether the package can be unloaded cleanly ... OK 2026-05-01T04:23:31.501135Z 01O * checking whether the namespace can be loaded with stated dependencies ... OK 2026-05-01T04:23:31.641815Z 01O * checking whether the namespace can be unloaded cleanly ... OK 2026-05-01T04:23:31.815478Z 01O * checking loading without being on the library search path ... OK 2026-05-01T04:23:31.989954Z 01O * checking dependencies in R code ... OK 2026-05-01T04:23:32.595379Z 01O * checking S3 generic/method consistency ... OK 2026-05-01T04:23:33.184572Z 01O * checking replacement functions ... OK 2026-05-01T04:23:33.356064Z 01O * checking foreign function calls ... OK 2026-05-01T04:23:33.980408Z 01O * checking R code for possible problems ... OK 2026-05-01T04:23:42.299966Z 01O * checking Rd files ... OK 2026-05-01T04:23:42.624486Z 01O * checking Rd metadata ... OK 2026-05-01T04:23:42.666065Z 01O * checking Rd cross-references ... OK 2026-05-01T04:23:42.860282Z 01O * checking for missing documentation entries ... OK 2026-05-01T04:23:43.054528Z 01O * checking for code/documentation mismatches ... OK 2026-05-01T04:23:43.941991Z 01O * checking Rd \usage sections ... OK 2026-05-01T04:23:44.916372Z 01O * checking Rd contents ... OK 2026-05-01T04:23:45.215238Z 01O * checking for unstated dependencies in examples ... OK 2026-05-01T04:23:45.646315Z 01O * checking line endings in shell scripts ... OK 2026-05-01T04:23:45.647035Z 01O * checking line endings in C/C++/Fortran sources/headers ... OK 2026-05-01T04:23:45.655728Z 01O * checking line endings in Makefiles ... OK 2026-05-01T04:23:45.656239Z 01O * checking compilation flags in Makevars ... OK 2026-05-01T04:23:45.714849Z 01O * checking for GNU extensions in Makefiles ... OK 2026-05-01T04:23:45.715790Z 01O * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK 2026-05-01T04:23:45.718645Z 01O * checking compiled code ... NOTE 2026-05-01T04:23:45.777125Z 01O File ‘data.table/libs/data_table.so’: 2026-05-01T04:23:45.777127Z 01O Found non-API calls to R: ‘R_GetConnection’, ‘R_ReadConnection’ 2026-05-01T04:23:45.777862Z 01O 2026-05-01T04:23:45.777863Z 01O Compiled code should not call non-API entry points in R. 2026-05-01T04:23:45.777864Z 01O 2026-05-01T04:23:45.777864Z 01O See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual. 2026-05-01T04:23:45.778416Z 01O * checking installed files from ‘inst/doc’ ... OK 2026-05-01T04:23:45.854334Z 01O * checking files in ‘vignettes’ ... SKIPPED 2026-05-01T04:23:45.854808Z 01O * checking examples ... OK 2026-05-01T04:23:48.982473Z 01O * checking for unstated dependencies in ‘tests’ ... OK 2026-05-01T04:23:49.039970Z 01O * checking tests ... 2026-05-01T04:23:49.158415Z 01E Running ‘autoprint.R’ 2026-05-01T04:23:49.373016Z 01O 18,21d17 2026-05-01T04:23:49.373017Z 01O < a 2026-05-01T04:23:49.373018Z 01O < 2026-05-01T04:23:49.373018Z 01O < 1: 1 2026-05-01T04:23:49.373019Z 01O < 2: 3 2026-05-01T04:23:49.373019Z 01O 28,31d23 2026-05-01T04:23:49.373020Z 01O < a 2026-05-01T04:23:49.373020Z 01O < 2026-05-01T04:23:49.373020Z 01O < 1: 1 2026-05-01T04:23:49.373021Z 01O < 2: 3 2026-05-01T04:23:49.373021Z 01O 33,37d24 2026-05-01T04:23:49.373022Z 01O < Index: 2026-05-01T04:23:49.373022Z 01O < a 2026-05-01T04:23:49.373023Z 01O < 2026-05-01T04:23:49.373023Z 01O < 1: 1 2026-05-01T04:23:49.373024Z 01O < 2: 3 2026-05-01T04:23:49.373024Z 01O 39,43d25 2026-05-01T04:23:49.373024Z 01O < Index: 2026-05-01T04:23:49.373025Z 01O < a 2026-05-01T04:23:49.373025Z 01O < 2026-05-01T04:23:49.373026Z 01O < 1: 1 2026-05-01T04:23:49.373026Z 01O < 2: 3 2026-05-01T04:23:49.373026Z 01O 61,64d42 2026-05-01T04:23:49.373027Z 01O < a 2026-05-01T04:23:49.373027Z 01O < 2026-05-01T04:23:49.373028Z 01O < 1: 1 2026-05-01T04:23:49.373028Z 01O < 2: 5 2026-05-01T04:23:49.373028Z 01O 66,69d43 2026-05-01T04:23:49.373029Z 01O < a 2026-05-01T04:23:49.373029Z 01O < 2026-05-01T04:23:49.373030Z 01O < 1: 1 2026-05-01T04:23:49.373030Z 01O < 2: 6 2026-05-01T04:23:49.373031Z 01O 73,76d46 2026-05-01T04:23:49.373031Z 01O < a 2026-05-01T04:23:49.373031Z 01O < 2026-05-01T04:23:49.373032Z 01O < 1: 1 2026-05-01T04:23:49.373032Z 01O < 2: 5 2026-05-01T04:23:49.373033Z 01O 143,145d112 2026-05-01T04:23:49.373033Z 01O < a 2026-05-01T04:23:49.373033Z 01O < 2026-05-01T04:23:49.373034Z 01O < 1: 9 2026-05-01T04:23:49.373034Z 01O 151,154d117 2026-05-01T04:23:49.373035Z 01O < a 2026-05-01T04:23:49.373035Z 01O < 2026-05-01T04:23:49.373035Z 01O < 1: 10 2026-05-01T04:23:49.373036Z 01O < 2: 10 2026-05-01T04:23:49.373036Z 01O 156,159d118 2026-05-01T04:23:49.373057Z 01O < a 2026-05-01T04:23:49.373058Z 01O < 2026-05-01T04:23:49.373058Z 01O < 1: 10 2026-05-01T04:23:49.373059Z 01O < 2: 10 2026-05-01T04:23:49.373059Z 01O 161,164d119 2026-05-01T04:23:49.373059Z 01O < a 2026-05-01T04:23:49.373060Z 01O < 2026-05-01T04:23:49.373060Z 01O < 1: 10 2026-05-01T04:23:49.373061Z 01O < 2: 10 2026-05-01T04:23:49.373061Z 01O 210,212d164 2026-05-01T04:23:49.373061Z 01O < x y 2026-05-01T04:23:49.373062Z 01O < 2026-05-01T04:23:49.373062Z 01O < 1: 1 1 2026-05-01T04:23:49.366206Z 01E Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... Running ‘froll.R’ 2026-05-01T04:32:31.054505Z 01E Running ‘litedown.R’ 2026-05-01T04:32:31.315531Z 01E Running ‘main.R’ 2026-05-01T04:33:07.853703Z 01E Running ‘mergelist.R’ 2026-05-01T04:33:09.063709Z 01E Running ‘nafill.R’ 2026-05-01T04:33:09.467794Z 01E Running ‘optimize.R’ 2026-05-01T04:33:10.571946Z 01E Running ‘other.R’ 2026-05-01T04:33:10.747384Z 01E Running ‘programming.R’ 2026-05-01T04:33:11.224662Z 01E Running ‘S4.R’ 2026-05-01T04:33:11.491616Z 01E Running ‘types.R’ 2026-05-01T04:33:11.700225Z 01O OK 2026-05-01T04:33:11.701271Z 01O * DONE 2026-05-01T04:33:11.702032Z 01E 2026-05-01T04:33:11.702158Z 01O Status: 3 NOTEs 2026-05-01T04:33:11.702431Z 01E See 2026-05-01T04:33:11.702432Z 01E ‘/builds/Rdatatable/data.table/data.table.Rcheck/00check.log’ 2026-05-01T04:33:11.702432Z 01E for details. 2026-05-01T04:33:11.702433Z 01E 2026-05-01T04:33:11.702612Z 01E 2026-05-01T04:33:11.898759Z 00O section_end:1777609991:step_script 2026-05-01T04:33:11.898776Z 00O+section_start:1777609991:after_script 2026-05-01T04:33:11.899169Z 00O+Running after_script 2026-05-01T04:33:12.237257Z 01O Running after script... 2026-05-01T04:33:12.237275Z 01O $ mkdir -p bus/$CI_JOB_NAME 2026-05-01T04:33:12.238339Z 01O $ echo $CI_JOB_ID > bus/$CI_JOB_NAME/id 2026-05-01T04:33:12.238413Z 01O $ echo $CI_JOB_STATUS > bus/$CI_JOB_NAME/status 2026-05-01T04:33:12.238504Z 01O $ echo $CI_JOB_IMAGE > bus/$CI_JOB_NAME/image 2026-05-01T04:33:12.238611Z 01O $ [ -d data.table.Rcheck ] && mv data.table.Rcheck bus/$CI_JOB_NAME/ 2026-05-01T04:33:12.405881Z 00O section_end:1777609992:after_script 2026-05-01T04:33:12.405889Z 00O+section_start:1777609992:upload_artifacts_on_success 2026-05-01T04:33:12.406565Z 00O+Uploading artifacts for successful job 2026-05-01T04:33:12.807227Z 01O Uploading artifacts... 2026-05-01T04:33:12.893693Z 01E bus/test-lin-ancient-cran: found 694 matching artifact files and directories 2026-05-01T04:33:15.068401Z 01E Uploading artifacts as "archive" to coordinator... 201 Created correlation_id=2a91a24b8bcc4a278b1b823d40ab5dab id=14173257976 responseStatus=201 Created token=6e_LrE6Cy 2026-05-01T04:33:15.252543Z 00O section_end:1777609995:upload_artifacts_on_success 2026-05-01T04:33:15.252548Z 00O+section_start:1777609995:cleanup_file_variables 2026-05-01T04:33:15.252647Z 00O+Cleaning up project directory and file based variables 2026-05-01T04:33:15.756644Z 00O section_end:1777609995:cleanup_file_variables 2026-05-01T04:33:15.756648Z 00O+ 2026-05-01T04:33:15.781652Z 00O Job succeeded