2026-04-22T04:21:35.042422Z 00O Running with gitlab-runner 18.10.0~pre.705.ge11dde90 (e11dde90) 2026-04-22T04:21:35.042433Z 00O  on blue-3.saas-linux-medium-amd64.runners-manager.gitlab.com/default U4xQPDyhm, system ID: s_b59597d5b921 2026-04-22T04:21:35.042439Z 00O  feature flags: FF_USE_GIT_PROACTIVE_AUTH:true 2026-04-22T04:21:35.042459Z 00O Resolving secrets 2026-04-22T04:21:35.042575Z 00O section_start:1776831695:prepare_executor 2026-04-22T04:21:35.042576Z 00O+Preparing the "docker+machine" executor 2026-04-22T04:21:35.172733Z 00O Using Docker executor with image registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 ... 2026-04-22T04:21:39.206336Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 2026-04-22T04:21:39.206858Z 00O Authenticating with credentials from job payload (GitLab Registry) 2026-04-22T04:21:39.206864Z 00O Pulling docker image registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 ... 2026-04-22T04:22:07.176915Z 00O Using docker image sha256:8c79d964faeee45e329d6365dabcd1983cd15a93ff3fb807cb69cec3a944d96f for registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 with digest registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0@sha256:5ed0b6888446d55b932458648141f8a7489cf217c0d545d248c18405dd4dd118 ... 2026-04-22T04:22:07.176982Z 00O section_end:1776831727:prepare_executor 2026-04-22T04:22:07.176984Z 00O+section_start:1776831727:prepare_script 2026-04-22T04:22:07.177070Z 00O+Preparing environment 2026-04-22T04:22:07.177775Z 00O Using effective pull policy of [always] for container sha256:79d0181cd6fe7e85f9d5e145493403984f60a47e91a500fbd0029da6de144b87 2026-04-22T04:22:16.887251Z 01O Running on runner-u4xqpdyhm-project-3622566-concurrent-0 via runner-u4xqpdyhm-s-l-m-amd64-1776831644-71464e8e... 2026-04-22T04:22:17.060489Z 00O section_end:1776831737:prepare_script 2026-04-22T04:22:17.060493Z 00O+section_start:1776831737:get_sources 2026-04-22T04:22:17.061008Z 00O+Getting source from Git repository 2026-04-22T04:22:17.440729Z 01O Gitaly correlation ID: c9bfea3855b74390b7e853cfc8d7fdc8 2026-04-22T04:22:17.447566Z 01O Fetching changes... 2026-04-22T04:22:17.451085Z 01O Initialized empty Git repository in /builds/Rdatatable/data.table/.git/ 2026-04-22T04:22:17.453678Z 01O Created fresh repository. 2026-04-22T04:22:23.079444Z 01O Checking out ab8e8d99 as detached HEAD (ref is master)... 2026-04-22T04:22:23.268568Z 01O 2026-04-22T04:22:23.268573Z 01O Skipping Git submodules setup 2026-04-22T04:22:23.268574Z 01O $ git remote set-url origin "${CI_REPOSITORY_URL}" || echo 'Not a git repository; skipping' 2026-04-22T04:22:23.509450Z 00O section_end:1776831743:get_sources 2026-04-22T04:22:23.509457Z 00O+section_start:1776831743:download_artifacts 2026-04-22T04:22:23.510200Z 00O+Downloading artifacts 2026-04-22T04:22:23.912254Z 01O Downloading artifacts for mirror-packages (14031574175)... 2026-04-22T04:22:25.043974Z 01E Downloading artifacts from coordinator... ok  correlation_id=94fbcdedbb8d4b4b8ce8f971b65fb72a host=storage.googleapis.com id=14031574175 responseStatus=200 OK token=6e_hSHENK 2026-04-22T04:22:25.291924Z 01O Downloading artifacts for build (14031574176)... 2026-04-22T04:22:25.570296Z 01E Downloading artifacts from coordinator... ok  correlation_id=2cd1356bd26e4b15ae151559bb25ad58 host=storage.googleapis.com id=14031574176 responseStatus=200 OK token=6e_hSHENK 2026-04-22T04:22:26.360967Z 00O section_end:1776831746:download_artifacts 2026-04-22T04:22:26.360972Z 00O+section_start:1776831746:step_script 2026-04-22T04:22:26.361401Z 00O+Executing "step_script" stage of the job script 2026-04-22T04:22:26.361420Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 2026-04-22T04:22:26.362357Z 00O Using docker image sha256:8c79d964faeee45e329d6365dabcd1983cd15a93ff3fb807cb69cec3a944d96f for registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 with digest registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0@sha256:5ed0b6888446d55b932458648141f8a7489cf217c0d545d248c18405dd4dd118 ... 2026-04-22T04:22:26.707619Z 01O $ cp $(ls -1t bus/build/data.table_*.tar.gz | head -n 1) . 2026-04-22T04:22:26.717675Z 01O $ mkdir -p ~/.R 2026-04-22T04:22:26.718990Z 01O $ Rscript -e 'source(".ci/ci.R"); install.packages(dcf.dependencies("DESCRIPTION", which="all"), repos=file.path("file:", normalizePath("bus/mirror-packages/cran", mustWork=FALSE)), quiet=TRUE)' 2026-04-22T04:22:26.900632Z 01E also installing the dependencies ‘bit’, ‘R.oo’, ‘R.methodsS3’, ‘commonmark’ 2026-04-22T04:22:26.900636Z 01E 2026-04-22T04:23:02.462207Z 01E Updating HTML index of packages in '.Library' 2026-04-22T04:23:02.462849Z 01E Making 'packages.html' ... done 2026-04-22T04:23:02.476247Z 01E Warning message: 2026-04-22T04:23:02.476248Z 01E packages ‘xts’, ‘knitr’ are not available (for R version 3.5.0) 2026-04-22T04:23:02.483596Z 01O $ R CMD check --no-manual --no-build-vignettes --ignore-vignettes $(ls -1t data.table_*.tar.gz | head -n 1) 2026-04-22T04:23:02.629268Z 01O * using log directory ‘/builds/Rdatatable/data.table/data.table.Rcheck’ 2026-04-22T04:23:02.629534Z 01O * using R version 3.5.0 (2018-04-23) 2026-04-22T04:23:02.629737Z 01O * using platform: x86_64-pc-linux-gnu (64-bit) 2026-04-22T04:23:02.629962Z 01O * using session charset: UTF-8 2026-04-22T04:23:03.181687Z 01O * using options ‘--no-manual --ignore-vignettes’ 2026-04-22T04:23:03.182004Z 01O * checking for file ‘data.table/DESCRIPTION’ ... OK 2026-04-22T04:23:03.184484Z 01O * this is package ‘data.table’ version ‘1.18.99’ 2026-04-22T04:23:03.184726Z 01O * package encoding: UTF-8 2026-04-22T04:23:03.184942Z 01O * checking package namespace information ... OK 2026-04-22T04:23:03.190596Z 01O * checking package dependencies ... NOTE 2026-04-22T04:23:08.767717Z 01O Package suggested but not available for checking: ‘xts’ 2026-04-22T04:23:08.767720Z 01O 2026-04-22T04:23:08.767721Z 01O Package which this enhances but not available for checking: ‘knitr’ 2026-04-22T04:23:08.767727Z 01O * checking if this is a source package ... OK 2026-04-22T04:23:08.770985Z 01O * checking if there is a namespace ... OK 2026-04-22T04:23:08.779406Z 01O * checking for executable files ... OK 2026-04-22T04:23:09.747269Z 01O * checking for hidden files and directories ... OK 2026-04-22T04:23:09.750928Z 01O * checking for portable file names ... OK 2026-04-22T04:23:09.758347Z 01O * checking for sufficient/correct file permissions ... OK 2026-04-22T04:23:09.760527Z 01O * checking whether package ‘data.table’ can be installed ... OK 2026-04-22T04:23:27.122639Z 01O * checking installed package size ... NOTE 2026-04-22T04:23:27.130222Z 01O installed size is 8.5Mb 2026-04-22T04:23:27.131023Z 01O sub-directories of 1Mb or more: 2026-04-22T04:23:27.131490Z 01O doc 1.1Mb 2026-04-22T04:23:27.131491Z 01O libs 2.1Mb 2026-04-22T04:23:27.131491Z 01O po 1.7Mb 2026-04-22T04:23:27.131492Z 01O tests 2.2Mb 2026-04-22T04:23:27.131759Z 01O * checking package directory ... OK 2026-04-22T04:23:27.132183Z 01O * checking DESCRIPTION meta-information ... OK 2026-04-22T04:23:27.320251Z 01O * checking top-level files ... OK 2026-04-22T04:23:27.320577Z 01O * checking for left-over files ... OK 2026-04-22T04:23:27.323359Z 01O * checking index information ... OK 2026-04-22T04:23:27.484132Z 01O * checking package subdirectories ... OK 2026-04-22T04:23:27.682896Z 01O * checking R files for non-ASCII characters ... OK 2026-04-22T04:23:27.731507Z 01O * checking R files for syntax errors ... OK 2026-04-22T04:23:27.830416Z 01O * checking whether the package can be loaded ... OK 2026-04-22T04:23:27.995377Z 01O * checking whether the package can be loaded with stated dependencies ... OK 2026-04-22T04:23:28.133373Z 01O * checking whether the package can be unloaded cleanly ... OK 2026-04-22T04:23:28.277585Z 01O * checking whether the namespace can be loaded with stated dependencies ... OK 2026-04-22T04:23:28.420198Z 01O * checking whether the namespace can be unloaded cleanly ... OK 2026-04-22T04:23:28.590789Z 01O * checking loading without being on the library search path ... OK 2026-04-22T04:23:28.765660Z 01O * checking dependencies in R code ... OK 2026-04-22T04:23:29.387601Z 01O * checking S3 generic/method consistency ... OK 2026-04-22T04:23:29.971118Z 01O * checking replacement functions ... OK 2026-04-22T04:23:30.138597Z 01O * checking foreign function calls ... OK 2026-04-22T04:23:30.761470Z 01O * checking R code for possible problems ... OK 2026-04-22T04:23:39.040208Z 01O * checking Rd files ... OK 2026-04-22T04:23:39.372789Z 01O * checking Rd metadata ... OK 2026-04-22T04:23:39.418428Z 01O * checking Rd cross-references ... OK 2026-04-22T04:23:39.616579Z 01O * checking for missing documentation entries ... OK 2026-04-22T04:23:39.805367Z 01O * checking for code/documentation mismatches ... OK 2026-04-22T04:23:40.675901Z 01O * checking Rd \usage sections ... OK 2026-04-22T04:23:41.652286Z 01O * checking Rd contents ... OK 2026-04-22T04:23:41.947600Z 01O * checking for unstated dependencies in examples ... OK 2026-04-22T04:23:42.405608Z 01O * checking line endings in shell scripts ... OK 2026-04-22T04:23:42.406356Z 01O * checking line endings in C/C++/Fortran sources/headers ... OK 2026-04-22T04:23:42.415306Z 01O * checking line endings in Makefiles ... OK 2026-04-22T04:23:42.415861Z 01O * checking compilation flags in Makevars ... OK 2026-04-22T04:23:42.473966Z 01O * checking for GNU extensions in Makefiles ... OK 2026-04-22T04:23:42.475013Z 01O * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK 2026-04-22T04:23:42.477943Z 01O * checking compiled code ... NOTE 2026-04-22T04:23:42.538091Z 01O File ‘data.table/libs/data_table.so’: 2026-04-22T04:23:42.538093Z 01O Found non-API calls to R: ‘R_GetConnection’, ‘R_ReadConnection’ 2026-04-22T04:23:42.538712Z 01O 2026-04-22T04:23:42.538713Z 01O Compiled code should not call non-API entry points in R. 2026-04-22T04:23:42.538714Z 01O 2026-04-22T04:23:42.538714Z 01O See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual. 2026-04-22T04:23:42.539242Z 01O * checking installed files from ‘inst/doc’ ... OK 2026-04-22T04:23:42.615489Z 01O * checking files in ‘vignettes’ ... SKIPPED 2026-04-22T04:23:42.615853Z 01O * checking examples ... OK 2026-04-22T04:23:45.819957Z 01O * checking for unstated dependencies in ‘tests’ ... OK 2026-04-22T04:23:45.879432Z 01O * checking tests ... 2026-04-22T04:23:46.002250Z 01E Running ‘autoprint.R’ 2026-04-22T04:23:46.216962Z 01O 18,21d17 2026-04-22T04:23:46.216962Z 01O < a 2026-04-22T04:23:46.216963Z 01O < 2026-04-22T04:23:46.216963Z 01O < 1: 1 2026-04-22T04:23:46.216964Z 01O < 2: 3 2026-04-22T04:23:46.216964Z 01O 28,31d23 2026-04-22T04:23:46.216965Z 01O < a 2026-04-22T04:23:46.216965Z 01O < 2026-04-22T04:23:46.216966Z 01O < 1: 1 2026-04-22T04:23:46.216966Z 01O < 2: 3 2026-04-22T04:23:46.216967Z 01O 33,37d24 2026-04-22T04:23:46.216967Z 01O < Index: 2026-04-22T04:23:46.216967Z 01O < a 2026-04-22T04:23:46.216968Z 01O < 2026-04-22T04:23:46.216968Z 01O < 1: 1 2026-04-22T04:23:46.216969Z 01O < 2: 3 2026-04-22T04:23:46.216969Z 01O 39,43d25 2026-04-22T04:23:46.216970Z 01O < Index: 2026-04-22T04:23:46.216970Z 01O < a 2026-04-22T04:23:46.216970Z 01O < 2026-04-22T04:23:46.216971Z 01O < 1: 1 2026-04-22T04:23:46.216971Z 01O < 2: 3 2026-04-22T04:23:46.216972Z 01O 61,64d42 2026-04-22T04:23:46.216972Z 01O < a 2026-04-22T04:23:46.216972Z 01O < 2026-04-22T04:23:46.216973Z 01O < 1: 1 2026-04-22T04:23:46.216973Z 01O < 2: 5 2026-04-22T04:23:46.216974Z 01O 66,69d43 2026-04-22T04:23:46.216974Z 01O < a 2026-04-22T04:23:46.216974Z 01O < 2026-04-22T04:23:46.216975Z 01O < 1: 1 2026-04-22T04:23:46.216975Z 01O < 2: 6 2026-04-22T04:23:46.216976Z 01O 73,76d46 2026-04-22T04:23:46.216976Z 01O < a 2026-04-22T04:23:46.216976Z 01O < 2026-04-22T04:23:46.216977Z 01O < 1: 1 2026-04-22T04:23:46.216977Z 01O < 2: 5 2026-04-22T04:23:46.216978Z 01O 143,145d112 2026-04-22T04:23:46.216978Z 01O < a 2026-04-22T04:23:46.216979Z 01O < 2026-04-22T04:23:46.216979Z 01O < 1: 9 2026-04-22T04:23:46.216979Z 01O 151,154d117 2026-04-22T04:23:46.216980Z 01O < a 2026-04-22T04:23:46.216980Z 01O < 2026-04-22T04:23:46.216981Z 01O < 1: 10 2026-04-22T04:23:46.216981Z 01O < 2: 10 2026-04-22T04:23:46.216981Z 01O 156,159d118 2026-04-22T04:23:46.217019Z 01O < a 2026-04-22T04:23:46.217020Z 01O < 2026-04-22T04:23:46.217020Z 01O < 1: 10 2026-04-22T04:23:46.217020Z 01O < 2: 10 2026-04-22T04:23:46.217021Z 01O 161,164d119 2026-04-22T04:23:46.217021Z 01O < a 2026-04-22T04:23:46.217022Z 01O < 2026-04-22T04:23:46.217022Z 01O < 1: 10 2026-04-22T04:23:46.217022Z 01O < 2: 10 2026-04-22T04:23:46.217023Z 01O 210,212d164 2026-04-22T04:23:46.217023Z 01O < x y 2026-04-22T04:23:46.217024Z 01O < 2026-04-22T04:23:46.217024Z 01O < 1: 1 1 2026-04-22T04:23:46.210344Z 01E Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... Running ‘froll.R’ 2026-04-22T04:32:31.895448Z 01E Running ‘litedown.R’ 2026-04-22T04:32:32.159086Z 01E Running ‘main.R’ 2026-04-22T04:33:08.564456Z 01E Running ‘mergelist.R’ 2026-04-22T04:33:09.762377Z 01E Running ‘nafill.R’ 2026-04-22T04:33:10.169857Z 01E Running ‘optimize.R’ 2026-04-22T04:33:11.283524Z 01E Running ‘other.R’ 2026-04-22T04:33:11.461737Z 01E Running ‘programming.R’ 2026-04-22T04:33:11.948539Z 01E Running ‘S4.R’ 2026-04-22T04:33:12.214002Z 01E Running ‘types.R’ 2026-04-22T04:33:12.423189Z 01O OK 2026-04-22T04:33:12.424256Z 01O * DONE 2026-04-22T04:33:12.425030Z 01E 2026-04-22T04:33:12.425127Z 01O Status: 3 NOTEs 2026-04-22T04:33:12.425337Z 01E See 2026-04-22T04:33:12.425338Z 01E ‘/builds/Rdatatable/data.table/data.table.Rcheck/00check.log’ 2026-04-22T04:33:12.425339Z 01E for details. 2026-04-22T04:33:12.425340Z 01E 2026-04-22T04:33:12.425567Z 01E 2026-04-22T04:33:12.610988Z 00O section_end:1776832392:step_script 2026-04-22T04:33:12.610994Z 00O+section_start:1776832392:after_script 2026-04-22T04:33:12.611400Z 00O+Running after_script 2026-04-22T04:33:12.939650Z 01O Running after script... 2026-04-22T04:33:12.939672Z 01O $ mkdir -p bus/$CI_JOB_NAME 2026-04-22T04:33:12.940651Z 01O $ echo $CI_JOB_ID > bus/$CI_JOB_NAME/id 2026-04-22T04:33:12.940689Z 01O $ echo $CI_JOB_STATUS > bus/$CI_JOB_NAME/status 2026-04-22T04:33:12.940827Z 01O $ echo $CI_JOB_IMAGE > bus/$CI_JOB_NAME/image 2026-04-22T04:33:12.940891Z 01O $ [ -d data.table.Rcheck ] && mv data.table.Rcheck bus/$CI_JOB_NAME/ 2026-04-22T04:33:13.106164Z 00O section_end:1776832393:after_script 2026-04-22T04:33:13.106171Z 00O+section_start:1776832393:upload_artifacts_on_success 2026-04-22T04:33:13.106875Z 00O+Uploading artifacts for successful job 2026-04-22T04:33:13.535648Z 01O Uploading artifacts... 2026-04-22T04:33:13.616537Z 01E bus/test-lin-ancient-cran: found 694 matching artifact files and directories 2026-04-22T04:33:15.832462Z 01E Uploading artifacts as "archive" to coordinator... 201 Created correlation_id=ac4b7fa27c054c6d9f9a25eb192689a7 id=14031574182 responseStatus=201 Created token=6e_hSHENK 2026-04-22T04:33:16.001193Z 00O section_end:1776832396:upload_artifacts_on_success 2026-04-22T04:33:16.001197Z 00O+section_start:1776832396:cleanup_file_variables 2026-04-22T04:33:16.001318Z 00O+Cleaning up project directory and file based variables 2026-04-22T04:33:16.497307Z 00O section_end:1776832396:cleanup_file_variables 2026-04-22T04:33:16.497312Z 00O+ 2026-04-22T04:33:16.527431Z 00O Job succeeded