2026-06-15T04:21:06.726959Z 00O Running with gitlab-runner 19.0.0~pre.1138.ga0a1e0e8 (a0a1e0e8) 2026-06-15T04:21:06.726971Z 00O  on blue-2.saas-linux-medium-amd64.runners-manager.gitlab.com/default ZQ74L_riD, system ID: s_805fb2e5035f 2026-06-15T04:21:06.726976Z 00O  feature flags: FF_USE_GIT_PROACTIVE_AUTH:true 2026-06-15T04:21:06.726996Z 00O Resolving secrets 2026-06-15T04:21:06.727132Z 00O section_start:1781497266:prepare_executor 2026-06-15T04:21:06.727133Z 00O+Preparing the "docker+machine" executor 2026-06-15T04:21:06.847185Z 00O Using Docker executor with image registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 ... 2026-06-15T04:21:09.532166Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 2026-06-15T04:21:09.532591Z 00O Authenticating with credentials from job payload (GitLab Registry) 2026-06-15T04:21:09.532599Z 00O Pulling docker image registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 ... 2026-06-15T04:21:27.518005Z 00O Using docker image sha256:8c79d964faeee45e329d6365dabcd1983cd15a93ff3fb807cb69cec3a944d96f for registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 with digest registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0@sha256:5ed0b6888446d55b932458648141f8a7489cf217c0d545d248c18405dd4dd118 ... 2026-06-15T04:21:27.518076Z 00O section_end:1781497287:prepare_executor 2026-06-15T04:21:27.518077Z 00O+section_start:1781497287:prepare_script 2026-06-15T04:21:27.518149Z 00O+Preparing environment 2026-06-15T04:21:27.518788Z 00O Using effective pull policy of [always] for container sha256:553931392244bce2612a3189773141b9c7a36cc4b62ee816f4ff80cdc04c2465 2026-06-15T04:21:36.747790Z 01O Running on runner-zq74lrid-project-3622566-concurrent-0 via runner-zq74lrid-s-l-m-amd64-1781497135-fb6acef2... 2026-06-15T04:21:36.858462Z 00O section_end:1781497296:prepare_script 2026-06-15T04:21:36.858466Z 00O+section_start:1781497296:get_sources 2026-06-15T04:21:36.858977Z 00O+Getting source from Git repository 2026-06-15T04:21:37.073405Z 01O Gitaly correlation ID: f742775cb833479c958527272b9ed010 2026-06-15T04:21:37.076230Z 01O Fetching changes... 2026-06-15T04:21:37.077858Z 01O Initialized empty Git repository in /builds/Rdatatable/data.table/.git/ 2026-06-15T04:21:37.079185Z 01O Created fresh repository. 2026-06-15T04:21:40.335161Z 01O Checking out 9fb84861 as detached HEAD (ref is master)... 2026-06-15T04:21:40.434942Z 01O 2026-06-15T04:21:40.434944Z 01O Skipping Git submodules setup 2026-06-15T04:21:40.434945Z 01O $ git remote set-url origin "${CI_REPOSITORY_URL}" || echo 'Not a git repository; skipping' 2026-06-15T04:21:40.591672Z 00O section_end:1781497300:get_sources 2026-06-15T04:21:40.591675Z 00O+section_start:1781497300:download_artifacts 2026-06-15T04:21:40.592367Z 00O+Downloading artifacts 2026-06-15T04:21:40.827070Z 01O Downloading artifacts for mirror-packages (14850332670)... 2026-06-15T04:21:41.029897Z 01E Direct download from storage.googleapis.com  correlation_id=1842cb972a5f4b0eb2fed6f6659105a6 id=14850332670 status=302 token=70_3Kzerm 2026-06-15T04:21:41.735548Z 01E Downloading artifacts from coordinator... ok  correlation_id=1842cb972a5f4b0eb2fed6f6659105a6 id=14850332670 status=302 token=70_3Kzerm 2026-06-15T04:21:42.250441Z 01O Downloading artifacts for build (14850332671)... 2026-06-15T04:21:42.394303Z 01E Direct download from storage.googleapis.com  correlation_id=f9d81a62fd564b69ad5a7f7a9e4502da id=14850332671 status=302 token=70_3Kzerm 2026-06-15T04:21:42.573629Z 01E Downloading artifacts from coordinator... ok  correlation_id=f9d81a62fd564b69ad5a7f7a9e4502da id=14850332671 status=302 token=70_3Kzerm 2026-06-15T04:21:43.183054Z 00O section_end:1781497303:download_artifacts 2026-06-15T04:21:43.183058Z 00O+section_start:1781497303:step_script 2026-06-15T04:21:43.183454Z 00O+Executing "step_script" stage of the job script 2026-06-15T04:21:43.183474Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 2026-06-15T04:21:43.184167Z 00O Using docker image sha256:8c79d964faeee45e329d6365dabcd1983cd15a93ff3fb807cb69cec3a944d96f for registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0 with digest registry.gitlab.com/rdatatable/dockerfiles/r-3.5.0@sha256:5ed0b6888446d55b932458648141f8a7489cf217c0d545d248c18405dd4dd118 ... 2026-06-15T04:21:43.401931Z 01O $ cp $(ls -1t bus/build/data.table_*.tar.gz | head -n 1) . 2026-06-15T04:21:43.405683Z 01O $ mkdir -p ~/.R 2026-06-15T04:21:43.406252Z 01O $ Rscript -e 'source(".ci/ci.R"); install.packages(dcf.dependencies("DESCRIPTION", which="all"), repos=file.path("file:", normalizePath("bus/mirror-packages/cran", mustWork=FALSE)), quiet=TRUE)' 2026-06-15T04:21:43.506452Z 01E also installing the dependencies ‘bit’, ‘R.oo’, ‘R.methodsS3’, ‘commonmark’ 2026-06-15T04:21:43.506457Z 01E 2026-06-15T04:22:03.608139Z 01E Updating HTML index of packages in '.Library' 2026-06-15T04:22:03.608706Z 01E Making 'packages.html' ... done 2026-06-15T04:22:03.616012Z 01E Warning message: 2026-06-15T04:22:03.616013Z 01E packages ‘xts’, ‘knitr’ are not available (for R version 3.5.0) 2026-06-15T04:22:03.619126Z 01O $ R CMD check --no-manual --no-build-vignettes --ignore-vignettes $(ls -1t data.table_*.tar.gz | head -n 1) 2026-06-15T04:22:03.703506Z 01O * using log directory ‘/builds/Rdatatable/data.table/data.table.Rcheck’ 2026-06-15T04:22:03.703514Z 01O * using R version 3.5.0 (2018-04-23) 2026-06-15T04:22:03.703650Z 01O * using platform: x86_64-pc-linux-gnu (64-bit) 2026-06-15T04:22:03.703716Z 01O * using session charset: UTF-8 2026-06-15T04:22:04.028423Z 01O * using options ‘--no-manual --ignore-vignettes’ 2026-06-15T04:22:04.028531Z 01O * checking for file ‘data.table/DESCRIPTION’ ... OK 2026-06-15T04:22:04.030101Z 01O * this is package ‘data.table’ version ‘1.18.99’ 2026-06-15T04:22:04.030160Z 01O * package encoding: UTF-8 2026-06-15T04:22:04.030275Z 01O * checking package namespace information ... OK 2026-06-15T04:22:04.033371Z 01O * checking package dependencies ... NOTE 2026-06-15T04:22:09.126051Z 01O Package suggested but not available for checking: ‘xts’ 2026-06-15T04:22:09.126052Z 01O 2026-06-15T04:22:09.126052Z 01O Package which this enhances but not available for checking: ‘knitr’ 2026-06-15T04:22:09.126053Z 01O * checking if this is a source package ... OK 2026-06-15T04:22:09.127876Z 01O * checking if there is a namespace ... OK 2026-06-15T04:22:09.132780Z 01O * checking for executable files ... OK 2026-06-15T04:22:09.709188Z 01O * checking for hidden files and directories ... OK 2026-06-15T04:22:09.710723Z 01O * checking for portable file names ... OK 2026-06-15T04:22:09.715098Z 01O * checking for sufficient/correct file permissions ... OK 2026-06-15T04:22:09.716211Z 01O * checking whether package ‘data.table’ can be installed ... OK 2026-06-15T04:22:19.977156Z 01O * checking installed package size ... NOTE 2026-06-15T04:22:19.980325Z 01O installed size is 8.5Mb 2026-06-15T04:22:19.980717Z 01O sub-directories of 1Mb or more: 2026-06-15T04:22:19.981093Z 01O doc 1.1Mb 2026-06-15T04:22:19.981094Z 01O libs 2.2Mb 2026-06-15T04:22:19.981094Z 01O po 1.7Mb 2026-06-15T04:22:19.981094Z 01O tests 2.2Mb 2026-06-15T04:22:19.981134Z 01O * checking package directory ... OK 2026-06-15T04:22:19.981318Z 01O * checking DESCRIPTION meta-information ... OK 2026-06-15T04:22:20.081912Z 01O * checking top-level files ... OK 2026-06-15T04:22:20.082066Z 01O * checking for left-over files ... OK 2026-06-15T04:22:20.083412Z 01O * checking index information ... OK 2026-06-15T04:22:20.168803Z 01O * checking package subdirectories ... OK 2026-06-15T04:22:20.273741Z 01O * checking R files for non-ASCII characters ... OK 2026-06-15T04:22:20.301120Z 01O * checking R files for syntax errors ... OK 2026-06-15T04:22:20.351041Z 01O * checking whether the package can be loaded ... OK 2026-06-15T04:22:20.442937Z 01O * checking whether the package can be loaded with stated dependencies ... OK 2026-06-15T04:22:20.518337Z 01O * checking whether the package can be unloaded cleanly ... OK 2026-06-15T04:22:20.594349Z 01O * checking whether the namespace can be loaded with stated dependencies ... OK 2026-06-15T04:22:20.671264Z 01O * checking whether the namespace can be unloaded cleanly ... OK 2026-06-15T04:22:20.767484Z 01O * checking loading without being on the library search path ... OK 2026-06-15T04:22:20.863094Z 01O * checking dependencies in R code ... OK 2026-06-15T04:22:21.189133Z 01O * checking S3 generic/method consistency ... OK 2026-06-15T04:22:21.547256Z 01O * checking replacement functions ... OK 2026-06-15T04:22:21.641157Z 01O * checking foreign function calls ... OK 2026-06-15T04:22:21.972595Z 01O * checking R code for possible problems ... OK 2026-06-15T04:22:26.153559Z 01O * checking Rd files ... OK 2026-06-15T04:22:26.323804Z 01O * checking Rd metadata ... OK 2026-06-15T04:22:26.346020Z 01O * checking Rd cross-references ... OK 2026-06-15T04:22:26.453279Z 01O * checking for missing documentation entries ... OK 2026-06-15T04:22:26.561739Z 01O * checking for code/documentation mismatches ... OK 2026-06-15T04:22:27.055304Z 01O * checking Rd \usage sections ... OK 2026-06-15T04:22:27.636796Z 01O * checking Rd contents ... OK 2026-06-15T04:22:27.795624Z 01O * checking for unstated dependencies in examples ... OK 2026-06-15T04:22:28.020191Z 01O * checking line endings in shell scripts ... OK 2026-06-15T04:22:28.020660Z 01O * checking line endings in C/C++/Fortran sources/headers ... OK 2026-06-15T04:22:28.025242Z 01O * checking line endings in Makefiles ... OK 2026-06-15T04:22:28.025487Z 01O * checking compilation flags in Makevars ... OK 2026-06-15T04:22:28.053024Z 01O * checking for GNU extensions in Makefiles ... OK 2026-06-15T04:22:28.053531Z 01O * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK 2026-06-15T04:22:28.054954Z 01O * checking compiled code ... NOTE 2026-06-15T04:22:28.084378Z 01O File ‘data.table/libs/data.table.so’: 2026-06-15T04:22:28.084379Z 01O Found non-API calls to R: ‘R_GetConnection’, ‘R_ReadConnection’ 2026-06-15T04:22:28.084801Z 01O 2026-06-15T04:22:28.084802Z 01O Compiled code should not call non-API entry points in R. 2026-06-15T04:22:28.084802Z 01O 2026-06-15T04:22:28.084803Z 01O See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual. 2026-06-15T04:22:28.085105Z 01O * checking installed files from ‘inst/doc’ ... OK 2026-06-15T04:22:28.131783Z 01O * checking files in ‘vignettes’ ... SKIPPED 2026-06-15T04:22:28.131969Z 01O * checking examples ... OK 2026-06-15T04:22:30.398524Z 01O * checking for unstated dependencies in ‘tests’ ... OK 2026-06-15T04:22:30.428263Z 01O * checking tests ... 2026-06-15T04:22:30.496463Z 01E Running ‘autoprint.R’ 2026-06-15T04:22:30.616642Z 01O 18,21d17 2026-06-15T04:22:30.616665Z 01O < a 2026-06-15T04:22:30.616665Z 01O < 2026-06-15T04:22:30.616666Z 01O < 1: 1 2026-06-15T04:22:30.616666Z 01O < 2: 3 2026-06-15T04:22:30.616666Z 01O 28,31d23 2026-06-15T04:22:30.616667Z 01O < a 2026-06-15T04:22:30.616667Z 01O < 2026-06-15T04:22:30.616667Z 01O < 1: 1 2026-06-15T04:22:30.616668Z 01O < 2: 3 2026-06-15T04:22:30.616668Z 01O 33,37d24 2026-06-15T04:22:30.616668Z 01O < Index: 2026-06-15T04:22:30.616669Z 01O < a 2026-06-15T04:22:30.616669Z 01O < 2026-06-15T04:22:30.616669Z 01O < 1: 1 2026-06-15T04:22:30.616670Z 01O < 2: 3 2026-06-15T04:22:30.616670Z 01O 39,43d25 2026-06-15T04:22:30.616670Z 01O < Index: 2026-06-15T04:22:30.616671Z 01O < a 2026-06-15T04:22:30.616671Z 01O < 2026-06-15T04:22:30.616671Z 01O < 1: 1 2026-06-15T04:22:30.616672Z 01O < 2: 3 2026-06-15T04:22:30.616672Z 01O 61,64d42 2026-06-15T04:22:30.616672Z 01O < a 2026-06-15T04:22:30.616673Z 01O < 2026-06-15T04:22:30.616673Z 01O < 1: 1 2026-06-15T04:22:30.616673Z 01O < 2: 5 2026-06-15T04:22:30.616674Z 01O 66,69d43 2026-06-15T04:22:30.616674Z 01O < a 2026-06-15T04:22:30.616674Z 01O < 2026-06-15T04:22:30.616675Z 01O < 1: 1 2026-06-15T04:22:30.616675Z 01O < 2: 6 2026-06-15T04:22:30.616675Z 01O 73,76d46 2026-06-15T04:22:30.616676Z 01O < a 2026-06-15T04:22:30.616676Z 01O < 2026-06-15T04:22:30.616676Z 01O < 1: 1 2026-06-15T04:22:30.616677Z 01O < 2: 5 2026-06-15T04:22:30.616677Z 01O 143,145d112 2026-06-15T04:22:30.616677Z 01O < a 2026-06-15T04:22:30.616678Z 01O < 2026-06-15T04:22:30.616678Z 01O < 1: 9 2026-06-15T04:22:30.616678Z 01O 151,154d117 2026-06-15T04:22:30.616679Z 01O < a 2026-06-15T04:22:30.616679Z 01O < 2026-06-15T04:22:30.616679Z 01O < 1: 10 2026-06-15T04:22:30.616680Z 01O < 2: 10 2026-06-15T04:22:30.616680Z 01O 156,159d118 2026-06-15T04:22:30.616680Z 01O < a 2026-06-15T04:22:30.616681Z 01O < 2026-06-15T04:22:30.616681Z 01O < 1: 10 2026-06-15T04:22:30.616681Z 01O < 2: 10 2026-06-15T04:22:30.616682Z 01O 161,164d119 2026-06-15T04:22:30.616682Z 01O < a 2026-06-15T04:22:30.616682Z 01O < 2026-06-15T04:22:30.616683Z 01O < 1: 10 2026-06-15T04:22:30.616683Z 01O < 2: 10 2026-06-15T04:22:30.616683Z 01O 210,212d164 2026-06-15T04:22:30.616684Z 01O < x y 2026-06-15T04:22:30.616684Z 01O < 2026-06-15T04:22:30.616684Z 01O < 1: 1 1 2026-06-15T04:22:30.613351Z 01E Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... Running ‘froll.R’ 2026-06-15T04:27:35.627606Z 01E Running ‘litedown.R’ 2026-06-15T04:27:35.780973Z 01E Running ‘main.R’ 2026-06-15T04:27:58.597659Z 01E Running ‘mergelist.R’ 2026-06-15T04:27:59.194719Z 01E Running ‘nafill.R’ 2026-06-15T04:27:59.415124Z 01E Running ‘optimize.R’ 2026-06-15T04:28:00.023106Z 01E Running ‘other.R’ 2026-06-15T04:28:00.123624Z 01E Running ‘programming.R’ 2026-06-15T04:28:00.410835Z 01E Running ‘S4.R’ 2026-06-15T04:28:00.563685Z 01E Running ‘types.R’ 2026-06-15T04:28:00.680918Z 01O OK 2026-06-15T04:28:00.681413Z 01O * DONE 2026-06-15T04:28:00.681893Z 01E 2026-06-15T04:28:00.681961Z 01O Status: 3 NOTEs 2026-06-15T04:28:00.682082Z 01E See 2026-06-15T04:28:00.682083Z 01E ‘/builds/Rdatatable/data.table/data.table.Rcheck/00check.log’ 2026-06-15T04:28:00.682083Z 01E for details. 2026-06-15T04:28:00.682084Z 01E 2026-06-15T04:28:00.682212Z 01E 2026-06-15T04:28:00.812042Z 00O section_end:1781497680:step_script 2026-06-15T04:28:00.812049Z 00O+section_start:1781497680:after_script 2026-06-15T04:28:00.812439Z 00O+Running after_script 2026-06-15T04:28:01.010728Z 01O Running after script... 2026-06-15T04:28:01.010753Z 01O $ mkdir -p bus/$CI_JOB_NAME 2026-06-15T04:28:01.010761Z 01O $ echo $CI_JOB_ID > bus/$CI_JOB_NAME/id 2026-06-15T04:28:01.010762Z 01O $ echo $CI_JOB_STATUS > bus/$CI_JOB_NAME/status 2026-06-15T04:28:01.010763Z 01O $ echo $CI_JOB_IMAGE > bus/$CI_JOB_NAME/image 2026-06-15T04:28:01.010781Z 01O $ [ -d data.table.Rcheck ] && mv data.table.Rcheck bus/$CI_JOB_NAME/ 2026-06-15T04:28:01.122595Z 00O section_end:1781497681:after_script 2026-06-15T04:28:01.122599Z 00O+section_start:1781497681:upload_artifacts_on_success 2026-06-15T04:28:01.123293Z 00O+Uploading artifacts for successful job 2026-06-15T04:28:01.350657Z 01O Uploading artifacts... 2026-06-15T04:28:01.380033Z 01E bus/test-lin-ancient-cran: found 694 matching artifact files and directories 2026-06-15T04:28:03.199403Z 01E Uploading artifacts as "archive" to coordinator... 201 Created correlation_id=0aa37efbf4f64ef3bae4a09421e9ecf6 id=14850332677 status=201 token=70_3Kzerm 2026-06-15T04:28:03.316535Z 00O section_end:1781497683:upload_artifacts_on_success 2026-06-15T04:28:03.316540Z 00O+section_start:1781497683:cleanup_file_variables 2026-06-15T04:28:03.316632Z 00O+Cleaning up project directory and file based variables 2026-06-15T04:28:03.625415Z 00O section_end:1781497683:cleanup_file_variables 2026-06-15T04:28:03.625419Z 00O+ 2026-06-15T04:28:03.638016Z 00O Job succeeded