2026-09-15T04:20:21.999006Z 00O Running with gitlab-runner 19.4.0~pre.1956.g7b010e09 (7b010e09) 2026-09-15T04:20:21.999033Z 00O  on k8s.saas-linux-medium-amd64.runners-manager.gitlab.com/default j8vTLRhES, system ID: r_S2USvgnQHnwo 2026-09-15T04:20:21.999037Z 00O  UUID: 01a01aa6-2f91-7d2c-b24d-7e2d2752ac58 2026-09-15T04:20:21.999048Z 00O  feature flags: FF_USE_GIT_PROACTIVE_AUTH:true, FF_HASH_CACHE_KEYS:true, FF_MACHINE_OPTIONS_EXPAND_ENV:true 2026-09-15T04:20:21.999091Z 00O Resolving secrets 2026-09-15T04:20:21.999316Z 00O section_start:1789446021:prepare_executor  2026-09-15T04:20:21.999320Z 00O+Preparing the "docker+machine" executor 2026-09-15T04:20:22.167524Z 00O Using Docker executor with image registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san ... 2026-09-15T04:20:22.167577Z 00O Using helper image: registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 (overridden, default would be registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.4.0 ) 2026-09-15T04:20:22.167586Z 00O Using effective pull policy of [always] for container registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 2026-09-15T04:20:22.168369Z 00O Authenticating with credentials from job payload (GitLab Registry) 2026-09-15T04:20:22.168377Z 00O Pulling docker image registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 ... 2026-09-15T04:20:23.392347Z 00O Using docker image sha256:63a87ec6859e8e26664ce80c944c61f0336a93fcfcf17d898985365641731cef for registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 with digest registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper@sha256:8f7a4e1b7200c3be6a618a55ea7c6747feab2aa22cb729b400ef95b5d7396360 ... 2026-09-15T04:20:24.966287Z 00O Using helper image: registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 (overridden, default would be registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.4.0 ) 2026-09-15T04:20:24.966304Z 00O Using effective pull policy of [always] for container registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 2026-09-15T04:20:24.967227Z 00O Using docker image sha256:63a87ec6859e8e26664ce80c944c61f0336a93fcfcf17d898985365641731cef for registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 with digest registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper@sha256:8f7a4e1b7200c3be6a618a55ea7c6747feab2aa22cb729b400ef95b5d7396360 ... 2026-09-15T04:20:24.967243Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san 2026-09-15T04:20:24.967984Z 00O Authenticating with credentials from job payload (GitLab Registry) 2026-09-15T04:20:24.967994Z 00O Pulling docker image registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san ... 2026-09-15T04:20:42.449989Z 00O Using docker image sha256:abc59848d4260ece54fdb3b8fba7bfc8c5e3101250b61080bc0d04ecd0e28204 for registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san@sha256:ffcd1dfab899e02cc47640df67ba91e5cb0ebda866bea9cb21ade628f360bca7 ... 2026-09-15T04:20:42.450087Z 00O section_end:1789446042:prepare_executor  2026-09-15T04:20:42.450219Z 00O+section_start:1789446042:prepare_script  2026-09-15T04:20:42.450224Z 00O+Preparing environment 2026-09-15T04:20:42.450261Z 00O Using helper image: registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 (overridden, default would be registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.4.0 ) 2026-09-15T04:20:42.450272Z 00O Using effective pull policy of [always] for container registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 2026-09-15T04:20:42.451078Z 00O Using docker image sha256:63a87ec6859e8e26664ce80c944c61f0336a93fcfcf17d898985365641731cef for registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 with digest registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper@sha256:8f7a4e1b7200c3be6a618a55ea7c6747feab2aa22cb729b400ef95b5d7396360 ... 2026-09-15T04:20:42.451088Z 00O Using effective pull policy of [always] for container sha256:63a87ec6859e8e26664ce80c944c61f0336a93fcfcf17d898985365641731cef 2026-09-15T04:20:53.983638Z 01O Running on runner-j8vtlrhes-project-3622566-concurrent-0 via runner-j8vtlrhes-s-l-m-amd64-1789445967-ac392ea8... 2026-09-15T04:20:54.518478Z 00O section_end:1789446054:prepare_script  2026-09-15T04:20:54.519201Z 00O+section_start:1789446054:get_sources  2026-09-15T04:20:54.519207Z 00O+Getting source from Git repository 2026-09-15T04:20:55.119964Z 01O Gitaly correlation ID: 08aea63bf2cb480fbfdc64ccfb86d6de 2026-09-15T04:20:55.123733Z 01O Fetching changes... 2026-09-15T04:20:55.126051Z 01O Initialized empty Git repository in /builds/Rdatatable/data.table/.git/ 2026-09-15T04:20:55.127440Z 01O Created fresh repository. 2026-09-15T04:20:58.923347Z 01O Checking out a3eeb4c0 as detached HEAD (ref is master)... 2026-09-15T04:20:59.044812Z 01O 2026-09-15T04:20:59.044821Z 01O Skipping Git submodules setup 2026-09-15T04:20:59.044823Z 01O $ git remote set-url origin "${CI_REPOSITORY_URL}" || echo 'Not a git repository; skipping' 2026-09-15T04:20:59.220398Z 00O section_end:1789446059:get_sources  2026-09-15T04:20:59.221350Z 00O+section_start:1789446059:download_artifacts  2026-09-15T04:20:59.221355Z 00O+Downloading artifacts 2026-09-15T04:20:59.514757Z 01O Downloading artifacts for mirror-packages (16501040599)... 2026-09-15T04:20:59.708619Z 01E Direct download from storage.googleapis.com  correlation_id=a0ad83a9376b40e8a155f5760d37a285 id=16501040599 status=302 token=73_kvubs9 2026-09-15T04:21:00.191790Z 01E Downloading artifacts from coordinator... ok  correlation_id=a0ad83a9376b40e8a155f5760d37a285 id=16501040599 status=302 token=73_kvubs9 2026-09-15T04:21:00.633540Z 01O Downloading artifacts for build (16501040600)... 2026-09-15T04:21:00.803959Z 01E Direct download from storage.googleapis.com  correlation_id=d22e9a75ea6a4a60853b212334d88b4b id=16501040600 status=302 token=73_kvubs9 2026-09-15T04:21:01.046286Z 01E Downloading artifacts from coordinator... ok  correlation_id=d22e9a75ea6a4a60853b212334d88b4b id=16501040600 status=302 token=73_kvubs9 2026-09-15T04:21:01.671922Z 00O section_end:1789446061:download_artifacts  2026-09-15T04:21:01.672577Z 00O+section_start:1789446061:step_script  2026-09-15T04:21:01.672587Z 00O+Executing "step_script" stage of the job script 2026-09-15T04:21:01.672603Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san 2026-09-15T04:21:01.673812Z 00O Using docker image sha256:abc59848d4260ece54fdb3b8fba7bfc8c5e3101250b61080bc0d04ecd0e28204 for registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san@sha256:ffcd1dfab899e02cc47640df67ba91e5cb0ebda866bea9cb21ade628f360bca7 ... 2026-09-15T04:21:01.950985Z 01O $ cp $(ls -1t bus/build/data.table_*.tar.gz | head -n 1) . 2026-09-15T04:21:01.955036Z 01O $ mkdir -p ~/.R 2026-09-15T04:21:01.955939Z 01O $ Rscript -e 'source(".ci/ci.R"); install.packages(dcf.dependencies("DESCRIPTION", which="all"), repos=file.path("file:", normalizePath("bus/mirror-packages/cran", mustWork=FALSE)), quiet=TRUE)' 2026-09-15T04:21:02.417281Z 01E also installing the dependencies ‘bit’, ‘R.oo’, ‘R.methodsS3’, ‘lattice’, ‘commonmark’, ‘evaluate’, ‘highr’ 2026-09-15T04:21:02.417286Z 01E 2026-09-15T04:23:25.573414Z 01E Updating HTML index of packages in '.Library' 2026-09-15T04:23:25.574552Z 01E Making 'packages.html' ... done 2026-09-15T04:23:25.593352Z 01O $ res1=0; ASAN_OPTIONS=detect_leaks=1 R CMD check --no-manual $(ls -1t data.table_*.tar.gz | head -n 1) || res1=$? # collapsed multi-line command 2026-09-15T04:23:26.542769Z 01O * using log directory ‘/builds/Rdatatable/data.table/data.table.Rcheck’ 2026-09-15T04:23:26.542934Z 01O * using R Under development (unstable) (2026-09-13 r90534) 2026-09-15T04:23:26.543228Z 01O * using platform: x86_64-pc-linux-gnu 2026-09-15T04:23:26.543613Z 01O * R was compiled by 2026-09-15T04:23:26.543804Z 01O Debian clang version 21.1.8 (10) 2026-09-15T04:23:26.543806Z 01O GNU Fortran (Debian 16.2.0-1) 16.2.0 2026-09-15T04:23:26.544115Z 01O * running under: Debian GNU/Linux forky/sid 2026-09-15T04:23:26.544452Z 01O * using session charset: UTF-8 2026-09-15T04:23:26.545628Z 01O * current time: 2026-09-15 04:23:26 UTC 2026-09-15T04:23:28.017895Z 01O * using option ‘--no-manual’ 2026-09-15T04:23:28.018634Z 01O * checking for file ‘data.table/DESCRIPTION’ ... OK 2026-09-15T04:23:28.024214Z 01O * this is package ‘data.table’ version ‘1.18.99’ 2026-09-15T04:23:28.024521Z 01O * package encoding: UTF-8 2026-09-15T04:23:28.024906Z 01O * checking package namespace information ... OK 2026-09-15T04:23:28.051172Z 01O * checking package dependencies ... OK 2026-09-15T04:23:29.759272Z 01O * checking if this is a source package ... OK 2026-09-15T04:23:29.762470Z 01O * checking if there is a namespace ... OK 2026-09-15T04:23:29.766535Z 01O * checking for .dll and .exe files ... OK 2026-09-15T04:23:29.767405Z 01O * checking for hidden files and directories ... OK 2026-09-15T04:23:29.769744Z 01O * checking for portable file names ... OK 2026-09-15T04:23:29.779640Z 01O * checking for sufficient/correct file permissions ... OK 2026-09-15T04:23:29.781710Z 01O * checking whether package ‘data.table’ can be installed ... OK 2026-09-15T04:24:08.779055Z 01O * used C compiler: ‘Debian clang version 21.1.8 (10)’ 2026-09-15T04:24:08.779630Z 01O * checking installed package size ... INFO 2026-09-15T04:24:08.783358Z 01O installed size is 11.1Mb 2026-09-15T04:24:08.784546Z 01O sub-directories of 1Mb or more: 2026-09-15T04:24:08.785451Z 01O doc 1.1Mb 2026-09-15T04:24:08.785453Z 01O libs 4.7Mb 2026-09-15T04:24:08.785454Z 01O po 1.7Mb 2026-09-15T04:24:08.785455Z 01O tests 2.2Mb 2026-09-15T04:24:08.785842Z 01O * checking package directory ... OK 2026-09-15T04:24:08.786444Z 01O * checking ‘build’ directory ... OK 2026-09-15T04:24:08.787730Z 01O * checking DESCRIPTION meta-information ... OK 2026-09-15T04:24:10.262779Z 01O * checking top-level files ... OK 2026-09-15T04:24:10.264031Z 01O * checking for left-over files ... OK 2026-09-15T04:24:10.267986Z 01O * checking index information ... OK 2026-09-15T04:24:10.617665Z 01O * checking package subdirectories ... OK 2026-09-15T04:24:11.338760Z 01O * checking code files for non-ASCII characters ... OK 2026-09-15T04:24:11.433901Z 01O * checking R files for syntax errors ... OK 2026-09-15T04:24:11.590720Z 01O * checking whether the package can be loaded ... OK 2026-09-15T04:24:12.004649Z 01O * checking whether the package can be loaded with stated dependencies ... OK 2026-09-15T04:24:12.314609Z 01O * checking whether the package can be unloaded cleanly ... OK 2026-09-15T04:24:12.632433Z 01O * checking whether the namespace can be loaded with stated dependencies ... OK 2026-09-15T04:24:12.997962Z 01O * checking whether the namespace can be unloaded cleanly ... OK 2026-09-15T04:24:13.494123Z 01O * checking loading without being on the library search path ... OK 2026-09-15T04:24:14.522280Z 01O * checking whether startup messages can be suppressed ... OK 2026-09-15T04:24:14.997414Z 01O * checking dependencies in R code ... OK 2026-09-15T04:24:16.984634Z 01O * checking S3 generic/method consistency ... OK 2026-09-15T04:24:17.748167Z 01O * checking replacement functions ... OK 2026-09-15T04:24:18.189698Z 01O * checking foreign function calls ... OK 2026-09-15T04:24:20.079332Z 01O * checking R code for possible problems ... OK 2026-09-15T04:24:51.705098Z 01O * checking Rd files ... OK 2026-09-15T04:24:53.352429Z 01O * checking Rd metadata ... OK 2026-09-15T04:24:53.440934Z 01O * checking Rd cross-references ... OK 2026-09-15T04:24:54.187000Z 01O * checking for missing documentation entries ... OK 2026-09-15T04:24:54.694128Z 01O * checking for code/documentation mismatches ... OK 2026-09-15T04:24:56.979735Z 01O * checking Rd \usage sections ... OK 2026-09-15T04:24:59.066609Z 01O * checking Rd contents ... OK 2026-09-15T04:25:00.181987Z 01O * checking for unstated dependencies in examples ... OK 2026-09-15T04:25:01.214500Z 01O * checking line endings in shell scripts ... OK 2026-09-15T04:25:01.215440Z 01O * checking line endings in C/C++/Fortran sources/headers ... OK 2026-09-15T04:25:01.248428Z 01O * checking line endings in Makefiles ... OK 2026-09-15T04:25:01.249119Z 01O * checking compilation flags in Makevars ... OK 2026-09-15T04:25:01.346428Z 01O * checking for GNU extensions in Makefiles ... OK 2026-09-15T04:25:01.347718Z 01O * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK 2026-09-15T04:25:01.349661Z 01O * checking use of PKG_*FLAGS in Makefiles ... OK 2026-09-15T04:25:01.356253Z 01O * checking compiled code ... OK 2026-09-15T04:25:03.891368Z 01O * checking installed files from ‘inst/doc’ ... OK 2026-09-15T04:25:04.354595Z 01O * checking files in ‘vignettes’ ... OK 2026-09-15T04:25:04.805312Z 01O * checking examples ... OK 2026-09-15T04:25:11.421273Z 01O * checking for unstated dependencies in ‘tests’ ... OK 2026-09-15T04:25:11.548372Z 01O * checking tests ... 2026-09-15T04:25:11.792897Z 01O Running ‘autoprint.R’ 2026-09-15T04:25:12.341146Z 01O Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK 2026-09-15T04:25:12.349787Z 01O Running ‘froll.R’ 2026-09-15T04:44:18.543005Z 01O Running ‘litedown.R’ 2026-09-15T04:44:19.123398Z 01O Running ‘main.R’ 2026-09-15T04:45:48.908623Z 01O Running ‘mergelist.R’ 2026-09-15T04:45:52.450781Z 01O Running ‘nafill.R’ 2026-09-15T04:45:53.507072Z 01O Running ‘optimize.R’ 2026-09-15T04:45:56.379737Z 01O Running ‘other.R’ 2026-09-15T04:45:56.817902Z 01O Running ‘programming.R’ 2026-09-15T04:45:58.036575Z 01O Running ‘S4.R’ 2026-09-15T04:45:58.793072Z 01O Running ‘self.R’ 2026-09-15T04:45:59.278853Z 01O Running ‘types.R’ 2026-09-15T04:45:59.962057Z 01O OK 2026-09-15T04:46:00.405459Z 01O * checking for unstated dependencies in vignettes ... OK 2026-09-15T04:46:01.045216Z 01O * checking package vignettes ... OK 2026-09-15T04:46:02.917601Z 01O * checking re-building of vignette outputs ... OK 2026-09-15T04:46:44.494796Z 01O * DONE 2026-09-15T04:46:44.495635Z 01E 2026-09-15T04:46:44.495726Z 01O Status: OK 2026-09-15T04:46:44.496021Z 01E 2026-09-15T04:46:44.841917Z 00O section_end:1789447604:step_script  2026-09-15T04:46:44.842395Z 00O+section_start:1789447604:after_script  2026-09-15T04:46:44.842401Z 00O+Running after_script 2026-09-15T04:46:45.061991Z 01O Running after script... 2026-09-15T04:46:45.062022Z 01O $ mkdir -p bus/$CI_JOB_NAME 2026-09-15T04:46:45.062615Z 01O $ echo $CI_JOB_ID > bus/$CI_JOB_NAME/id 2026-09-15T04:46:45.062627Z 01O $ echo $CI_JOB_STATUS > bus/$CI_JOB_NAME/status 2026-09-15T04:46:45.062637Z 01O $ echo $CI_JOB_IMAGE > bus/$CI_JOB_NAME/image 2026-09-15T04:46:45.062642Z 01O $ [ -d data.table.Rcheck ] && mv data.table.Rcheck bus/$CI_JOB_NAME/ 2026-09-15T04:46:45.182255Z 00O section_end:1789447605:after_script  2026-09-15T04:46:45.183710Z 00O+section_start:1789447605:upload_artifacts_on_success  2026-09-15T04:46:45.183722Z 00O+Uploading artifacts for successful job 2026-09-15T04:46:45.426640Z 01O Uploading artifacts... 2026-09-15T04:46:45.458219Z 01E bus/test-lin-dev-clang-san: found 714 matching artifact files and directories 2026-09-15T04:46:46.829594Z 01E Uploading artifacts as "archive" to coordinator... 201 Created correlation_id=ea816be607dc4815a597098c3e8deda4 id=16501040607 status=201 token=73_kvubs9 2026-09-15T04:46:46.954340Z 00O section_end:1789447606:upload_artifacts_on_success  2026-09-15T04:46:46.954803Z 00O+section_start:1789447606:cleanup_file_variables  2026-09-15T04:46:46.954810Z 00O+Cleaning up project directory and file based variables 2026-09-15T04:46:47.303547Z 00O section_end:1789447607:cleanup_file_variables  2026-09-15T04:46:47.327806Z 00O Job succeeded