2026-01-30T04:22:17.472153Z 00O Running with gitlab-runner 18.7.0~pre.433.g3a5f2314 (3a5f2314) 2026-01-30T04:22:17.472164Z 00O  on blue-4.saas-linux-medium-amd64.runners-manager.gitlab.com/default DS1-6aDu5, system ID: s_eacbc5a4b586 2026-01-30T04:22:17.472182Z 00O Resolving secrets 2026-01-30T04:22:17.472301Z 00O section_start:1769746937:prepare_executor 2026-01-30T04:22:17.472302Z 00O+Preparing the "docker+machine" executor 2026-01-30T04:22:17.605117Z 00O Using Docker executor with image registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san ... 2026-01-30T04:22:21.979121Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san 2026-01-30T04:22:21.979697Z 00O Authenticating with credentials from job payload (GitLab Registry) 2026-01-30T04:22:21.979707Z 00O Pulling docker image registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san ... 2026-01-30T04:22:39.409329Z 00O Using docker image sha256:e8424b8f9c8e6f079599699ebfdea4df8fe253f9fd725fceff275390c4d72979 for registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san@sha256:5037432144bcd3a3df013744a90581212627c57e6b07ba9f68325ce89aac14ef ... 2026-01-30T04:22:39.409400Z 00O section_end:1769746959:prepare_executor 2026-01-30T04:22:39.409401Z 00O+section_start:1769746959:prepare_script 2026-01-30T04:22:39.409506Z 00O+Preparing environment 2026-01-30T04:22:39.410540Z 00O Using effective pull policy of [always] for container sha256:c2f6471c9853e8d265008d63506cb8a7f7d31390c2e8d8462278c58d7eb0f153 2026-01-30T04:22:51.225440Z 01O Running on runner-ds1-6adu5-project-3622566-concurrent-0 via runner-ds1-6adu5-s-l-m-amd64-1769746619-04f1a02f... 2026-01-30T04:22:51.400259Z 00O section_end:1769746971:prepare_script 2026-01-30T04:22:51.400266Z 00O+section_start:1769746971:get_sources 2026-01-30T04:22:51.400761Z 00O+Getting source from Git repository 2026-01-30T04:22:51.801661Z 01O Gitaly correlation ID: 3f956acce10442d1a403583d23fc69ce 2026-01-30T04:22:51.807950Z 01O Fetching changes... 2026-01-30T04:22:51.811391Z 01O Initialized empty Git repository in /builds/Rdatatable/data.table/.git/ 2026-01-30T04:22:51.813863Z 01O Created fresh repository. 2026-01-30T04:22:57.389424Z 01O Checking out 1bd88cbc as detached HEAD (ref is master)... 2026-01-30T04:22:57.584800Z 01O 2026-01-30T04:22:57.584807Z 01O Skipping Git submodules setup 2026-01-30T04:22:57.584808Z 01O $ git remote set-url origin "${CI_REPOSITORY_URL}" || echo 'Not a git repository; skipping' 2026-01-30T04:22:57.827897Z 00O section_end:1769746977:get_sources 2026-01-30T04:22:57.827902Z 00O+section_start:1769746977:download_artifacts 2026-01-30T04:22:57.828596Z 00O+Downloading artifacts 2026-01-30T04:22:58.266358Z 01O Downloading artifacts for build (12923844881)... 2026-01-30T04:22:58.563264Z 01E Downloading artifacts from coordinator... ok  correlation_id=68911a19f1474b2b8767765f0451a4ad host=storage.googleapis.com id=12923844881 responseStatus=200 OK token=6c_1kwsYZ 2026-01-30T04:22:58.581830Z 01O Downloading artifacts for mirror-packages (12923844875)... 2026-01-30T04:22:59.724890Z 01E Downloading artifacts from coordinator... ok  correlation_id=6c0cd8ca93ed44bf905ddfa9e6bec40a host=storage.googleapis.com id=12923844875 responseStatus=200 OK token=6c_1kwsYZ 2026-01-30T04:23:00.651640Z 00O section_end:1769746980:download_artifacts 2026-01-30T04:23:00.651646Z 00O+section_start:1769746980:step_script 2026-01-30T04:23:00.652059Z 00O+Executing "step_script" stage of the job script 2026-01-30T04:23:00.652078Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san 2026-01-30T04:23:00.653211Z 00O Using docker image sha256:e8424b8f9c8e6f079599699ebfdea4df8fe253f9fd725fceff275390c4d72979 for registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-clang-san@sha256:5037432144bcd3a3df013744a90581212627c57e6b07ba9f68325ce89aac14ef ... 2026-01-30T04:23:01.042599Z 01O $ cp $(ls -1t bus/build/data.table_*.tar.gz | head -n 1) . 2026-01-30T04:23:01.052471Z 01O $ mkdir -p ~/.R 2026-01-30T04:23:01.053960Z 01O $ Rscript -e 'source(".ci/ci.R"); install.packages(dcf.dependencies("DESCRIPTION", which="all"), repos=file.path("file:", normalizePath("bus/mirror-packages/cran", mustWork=FALSE)), quiet=TRUE)' 2026-01-30T04:23:01.796524Z 01E also installing the dependencies ‘bit’, ‘R.oo’, ‘R.methodsS3’, ‘lattice’, ‘commonmark’, ‘evaluate’, ‘highr’ 2026-01-30T04:23:01.796531Z 01E 2026-01-30T04:27:06.484390Z 01E Updating HTML index of packages in '.Library' 2026-01-30T04:27:06.487101Z 01E Making 'packages.html' ... done 2026-01-30T04:27:06.532377Z 01O $ res1=0; ASAN_OPTIONS=detect_leaks=1 R CMD check --no-manual $(ls -1t data.table_*.tar.gz | head -n 1) || res1=$? # collapsed multi-line command 2026-01-30T04:27:08.251403Z 01O * using log directory ‘/builds/Rdatatable/data.table/data.table.Rcheck’ 2026-01-30T04:27:08.252267Z 01O * using R Under development (unstable) (2026-01-28 r89344) 2026-01-30T04:27:08.252877Z 01O * using platform: x86_64-pc-linux-gnu 2026-01-30T04:27:08.253610Z 01O * R was compiled by 2026-01-30T04:27:08.254115Z 01O Debian clang version 21.1.8 (1+b1) 2026-01-30T04:27:08.254116Z 01O GNU Fortran (Debian 15.2.0-12) 15.2.0 2026-01-30T04:27:08.254891Z 01O * running under: Debian GNU/Linux forky/sid 2026-01-30T04:27:08.255619Z 01O * using session charset: UTF-8 2026-01-30T04:27:11.033749Z 01O * using option ‘--no-manual’ 2026-01-30T04:27:11.035324Z 01O * checking for file ‘data.table/DESCRIPTION’ ... OK 2026-01-30T04:27:11.045014Z 01O * this is package ‘data.table’ version ‘1.18.99’ 2026-01-30T04:27:11.045778Z 01O * package encoding: UTF-8 2026-01-30T04:27:11.046744Z 01O * checking package namespace information ... OK 2026-01-30T04:27:11.079980Z 01O * checking package dependencies ... OK 2026-01-30T04:27:13.691141Z 01O * checking if this is a source package ... OK 2026-01-30T04:27:13.698053Z 01O * checking if there is a namespace ... OK 2026-01-30T04:27:13.705950Z 01O * checking for .dll and .exe files ... OK 2026-01-30T04:27:13.708051Z 01O * checking for hidden files and directories ... OK 2026-01-30T04:27:13.713702Z 01O * checking for portable file names ... OK 2026-01-30T04:27:13.733026Z 01O * checking for sufficient/correct file permissions ... OK 2026-01-30T04:27:13.737350Z 01O * checking whether package ‘data.table’ can be installed ... OK 2026-01-30T04:28:13.630708Z 01O * used C compiler: ‘Debian clang version 21.1.8 (1+b1)’ 2026-01-30T04:28:13.631965Z 01O * checking installed package size ... INFO 2026-01-30T04:28:13.638452Z 01O installed size is 10.9Mb 2026-01-30T04:28:13.640772Z 01O sub-directories of 1Mb or more: 2026-01-30T04:28:13.642467Z 01O doc 1.1Mb 2026-01-30T04:28:13.642468Z 01O libs 4.5Mb 2026-01-30T04:28:13.642468Z 01O po 1.7Mb 2026-01-30T04:28:13.642469Z 01O tests 2.2Mb 2026-01-30T04:28:13.643152Z 01O * checking package directory ... OK 2026-01-30T04:28:13.644639Z 01O * checking ‘build’ directory ... OK 2026-01-30T04:28:13.647242Z 01O * checking DESCRIPTION meta-information ... OK 2026-01-30T04:28:16.410409Z 01O * checking top-level files ... OK 2026-01-30T04:28:16.412882Z 01O * checking for left-over files ... OK 2026-01-30T04:28:16.418544Z 01O * checking index information ... OK 2026-01-30T04:28:17.099777Z 01O * checking package subdirectories ... OK 2026-01-30T04:28:18.492671Z 01O * checking code files for non-ASCII characters ... OK 2026-01-30T04:28:18.670715Z 01O * checking R files for syntax errors ... OK 2026-01-30T04:28:18.948063Z 01O * checking whether the package can be loaded ... OK 2026-01-30T04:28:19.668314Z 01O * checking whether the package can be loaded with stated dependencies ... OK 2026-01-30T04:28:20.243502Z 01O * checking whether the package can be unloaded cleanly ... OK 2026-01-30T04:28:20.820582Z 01O * checking whether the namespace can be loaded with stated dependencies ... OK 2026-01-30T04:28:21.406948Z 01O * checking whether the namespace can be unloaded cleanly ... OK 2026-01-30T04:28:22.153146Z 01O * checking loading without being on the library search path ... OK 2026-01-30T04:28:23.636221Z 01O * checking whether startup messages can be suppressed ... OK 2026-01-30T04:28:24.345718Z 01O * checking dependencies in R code ... OK 2026-01-30T04:28:27.439321Z 01O * checking S3 generic/method consistency ... OK 2026-01-30T04:28:28.733506Z 01O * checking replacement functions ... OK 2026-01-30T04:28:29.391972Z 01O * checking foreign function calls ... OK 2026-01-30T04:28:32.524322Z 01O * checking R code for possible problems ... OK 2026-01-30T04:29:18.668194Z 01O * checking Rd files ... OK 2026-01-30T04:29:21.298083Z 01O * checking Rd metadata ... OK 2026-01-30T04:29:21.448100Z 01O * checking Rd cross-references ... OK 2026-01-30T04:29:22.517690Z 01O * checking for missing documentation entries ... OK 2026-01-30T04:29:23.338826Z 01O * checking for code/documentation mismatches ... OK 2026-01-30T04:29:26.901973Z 01O * checking Rd \usage sections ... OK 2026-01-30T04:29:30.260131Z 01O * checking Rd contents ... OK 2026-01-30T04:29:32.091388Z 01O * checking for unstated dependencies in examples ... OK 2026-01-30T04:29:33.752061Z 01O * checking line endings in shell scripts ... OK 2026-01-30T04:29:33.753673Z 01O * checking line endings in C/C++/Fortran sources/headers ... OK 2026-01-30T04:29:33.809919Z 01O * checking line endings in Makefiles ... OK 2026-01-30T04:29:33.811566Z 01O * checking compilation flags in Makevars ... OK 2026-01-30T04:29:33.969672Z 01O * checking for GNU extensions in Makefiles ... OK 2026-01-30T04:29:33.972297Z 01O * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK 2026-01-30T04:29:33.976365Z 01O * checking use of PKG_*FLAGS in Makefiles ... OK 2026-01-30T04:29:33.989993Z 01O * checking compiled code ... OK 2026-01-30T04:29:34.238058Z 01O * checking installed files from ‘inst/doc’ ... OK 2026-01-30T04:29:35.027867Z 01O * checking files in ‘vignettes’ ... OK 2026-01-30T04:29:35.824887Z 01O * checking examples ... OK 2026-01-30T04:29:44.684664Z 01O * checking for unstated dependencies in ‘tests’ ... OK 2026-01-30T04:29:44.923376Z 01O * checking tests ... 2026-01-30T04:29:45.386347Z 01O Running ‘autoprint.R’ 2026-01-30T04:29:46.220413Z 01O Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK 2026-01-30T04:29:46.236996Z 01O Running ‘froll.R’ 2026-01-30T05:01:41.345935Z 01O Running ‘litedown.R’ 2026-01-30T05:01:42.394379Z 01O Running ‘main.R’ 2026-01-30T05:04:05.356859Z 01O Running ‘mergelist.R’ 2026-01-30T05:04:11.074120Z 01O Running ‘nafill.R’ 2026-01-30T05:04:12.815886Z 01O Running ‘optimize.R’ 2026-01-30T05:04:17.594160Z 01O Running ‘other.R’ 2026-01-30T05:04:18.309458Z 01O Running ‘programming.R’ 2026-01-30T05:04:20.271567Z 01O Running ‘S4.R’ 2026-01-30T05:04:21.390191Z 01O Running ‘types.R’ 2026-01-30T05:04:22.317420Z 01O OK 2026-01-30T05:04:22.690215Z 01O * checking for unstated dependencies in vignettes ... OK 2026-01-30T05:04:23.727063Z 01O * checking package vignettes ... OK 2026-01-30T05:04:24.949908Z 01O * checking re-building of vignette outputs ... OK 2026-01-30T05:05:35.536854Z 01O * DONE 2026-01-30T05:05:35.538034Z 01E 2026-01-30T05:05:35.538373Z 01O Status: OK 2026-01-30T05:05:35.539293Z 01E 2026-01-30T05:05:36.006204Z 00O section_end:1769749536:step_script 2026-01-30T05:05:36.006212Z 00O+section_start:1769749536:after_script 2026-01-30T05:05:36.006596Z 00O+Running after_script 2026-01-30T05:05:36.366752Z 01O Running after script... 2026-01-30T05:05:36.366779Z 01O $ mkdir -p bus/$CI_JOB_NAME 2026-01-30T05:05:36.368194Z 01O $ echo $CI_JOB_ID > bus/$CI_JOB_NAME/id 2026-01-30T05:05:36.368243Z 01O $ echo $CI_JOB_STATUS > bus/$CI_JOB_NAME/status 2026-01-30T05:05:36.368273Z 01O $ echo $CI_JOB_IMAGE > bus/$CI_JOB_NAME/image 2026-01-30T05:05:36.368380Z 01O $ [ -d data.table.Rcheck ] && mv data.table.Rcheck bus/$CI_JOB_NAME/ 2026-01-30T05:05:36.548029Z 00O section_end:1769749536:after_script 2026-01-30T05:05:36.548035Z 00O+section_start:1769749536:upload_artifacts_on_success 2026-01-30T05:05:36.548775Z 00O+Uploading artifacts for successful job 2026-01-30T05:05:36.961064Z 01O Uploading artifacts... 2026-01-30T05:05:37.026071Z 01E bus/test-lin-dev-clang-san: found 706 matching artifact files and directories 2026-01-30T05:05:39.709177Z 01E Uploading artifacts as "archive" to coordinator... 201 Created correlation_id=ed02836e929a41f7a81f0f97fe4717a8 id=12923844964 responseStatus=201 Created token=6c_1kwsYZ 2026-01-30T05:05:39.899768Z 00O section_end:1769749539:upload_artifacts_on_success 2026-01-30T05:05:39.899773Z 00O+section_start:1769749539:cleanup_file_variables 2026-01-30T05:05:39.899885Z 00O+Cleaning up project directory and file based variables 2026-01-30T05:05:40.460333Z 00O section_end:1769749540:cleanup_file_variables 2026-01-30T05:05:40.460339Z 00O+ 2026-01-30T05:05:40.503387Z 00O Job succeeded