2026-09-15T04:20:22.162342Z 00O Running with gitlab-runner 19.4.0~pre.1956.g7b010e09 (7b010e09) 2026-09-15T04:20:22.162360Z 00O  on k8s.saas-linux-medium-amd64.runners-manager.gitlab.com/default j8vTLRhES, system ID: r_m7aQibhtb4ru 2026-09-15T04:20:22.162362Z 00O  UUID: 01a01aa6-2f91-7d2c-b24d-7e2d2752ac58 2026-09-15T04:20:22.162369Z 00O  feature flags: FF_USE_GIT_PROACTIVE_AUTH:true, FF_HASH_CACHE_KEYS:true, FF_MACHINE_OPTIONS_EXPAND_ENV:true 2026-09-15T04:20:22.162397Z 00O Resolving secrets 2026-09-15T04:20:22.162637Z 00O section_start:1789446022:prepare_executor  2026-09-15T04:20:22.162641Z 00O+Preparing the "docker+machine" executor 2026-09-15T04:20:22.311650Z 00O Using Docker executor with image registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-san ... 2026-09-15T04:20:22.311704Z 00O Using helper image: registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 (overridden, default would be registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.4.0 ) 2026-09-15T04:20:22.311715Z 00O Using effective pull policy of [always] for container registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 2026-09-15T04:20:22.312746Z 00O Authenticating with credentials from job payload (GitLab Registry) 2026-09-15T04:20:22.312753Z 00O Pulling docker image registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 ... 2026-09-15T04:20:23.610440Z 00O Using docker image sha256:63a87ec6859e8e26664ce80c944c61f0336a93fcfcf17d898985365641731cef for registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 with digest registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper@sha256:8f7a4e1b7200c3be6a618a55ea7c6747feab2aa22cb729b400ef95b5d7396360 ... 2026-09-15T04:20:25.277192Z 00O Using helper image: registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 (overridden, default would be registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.4.0 ) 2026-09-15T04:20:25.277207Z 00O Using effective pull policy of [always] for container registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 2026-09-15T04:20:25.278600Z 00O Using docker image sha256:63a87ec6859e8e26664ce80c944c61f0336a93fcfcf17d898985365641731cef for registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 with digest registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper@sha256:8f7a4e1b7200c3be6a618a55ea7c6747feab2aa22cb729b400ef95b5d7396360 ... 2026-09-15T04:20:25.278611Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-san 2026-09-15T04:20:25.279652Z 00O Authenticating with credentials from job payload (GitLab Registry) 2026-09-15T04:20:25.279663Z 00O Pulling docker image registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-san ... 2026-09-15T04:20:42.623078Z 00O Using docker image sha256:67e6f54dc2c271a8c6d20da9003b4f2f665cf2b84b9714df4b7821d87c228ae3 for registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-san with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-san@sha256:be0450cf11c59f07b7c2cb5f38718a0a86e0f401adb075f74604c57531de943d ... 2026-09-15T04:20:42.623186Z 00O section_end:1789446042:prepare_executor  2026-09-15T04:20:42.623348Z 00O+section_start:1789446042:prepare_script  2026-09-15T04:20:42.623357Z 00O+Preparing environment 2026-09-15T04:20:42.623405Z 00O Using helper image: registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 (overridden, default would be registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.4.0 ) 2026-09-15T04:20:42.623422Z 00O Using effective pull policy of [always] for container registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 2026-09-15T04:20:42.624313Z 00O Using docker image sha256:63a87ec6859e8e26664ce80c944c61f0336a93fcfcf17d898985365641731cef for registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-7b010e09 with digest registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper@sha256:8f7a4e1b7200c3be6a618a55ea7c6747feab2aa22cb729b400ef95b5d7396360 ... 2026-09-15T04:20:42.624340Z 00O Using effective pull policy of [always] for container sha256:63a87ec6859e8e26664ce80c944c61f0336a93fcfcf17d898985365641731cef 2026-09-15T04:20:53.081940Z 01O Running on runner-j8vtlrhes-project-3622566-concurrent-0 via runner-j8vtlrhes-s-l-m-amd64-1789445968-83d17119... 2026-09-15T04:20:53.211042Z 00O section_end:1789446053:prepare_script  2026-09-15T04:20:53.211573Z 00O+section_start:1789446053:get_sources  2026-09-15T04:20:53.211583Z 00O+Getting source from Git repository 2026-09-15T04:20:53.454564Z 01O Gitaly correlation ID: 8d66ae1458c44f53a81dcf4cd47433ce 2026-09-15T04:20:53.461074Z 01O Fetching changes... 2026-09-15T04:20:53.463360Z 01O Initialized empty Git repository in /builds/Rdatatable/data.table/.git/ 2026-09-15T04:20:53.464620Z 01O Created fresh repository. 2026-09-15T04:20:57.260165Z 01O Checking out a3eeb4c0 as detached HEAD (ref is master)... 2026-09-15T04:20:57.371131Z 01O 2026-09-15T04:20:57.371136Z 01O Skipping Git submodules setup 2026-09-15T04:20:57.371138Z 01O $ git remote set-url origin "${CI_REPOSITORY_URL}" || echo 'Not a git repository; skipping' 2026-09-15T04:20:57.537080Z 00O section_end:1789446057:get_sources  2026-09-15T04:20:57.537838Z 00O+section_start:1789446057:download_artifacts  2026-09-15T04:20:57.537844Z 00O+Downloading artifacts 2026-09-15T04:20:57.796531Z 01O Downloading artifacts for mirror-packages (16501040599)... 2026-09-15T04:20:58.013284Z 01E Direct download from storage.googleapis.com  correlation_id=bdd413eb57ab4de9ba908556e187fc8a id=16501040599 status=302 token=73_Mg4kSb 2026-09-15T04:20:58.694989Z 01E Downloading artifacts from coordinator... ok  correlation_id=bdd413eb57ab4de9ba908556e187fc8a id=16501040599 status=302 token=73_Mg4kSb 2026-09-15T04:20:59.134457Z 01O Downloading artifacts for build (16501040600)... 2026-09-15T04:20:59.319954Z 01E Direct download from storage.googleapis.com  correlation_id=de7098d83ef4482fb579d4df4ac87582 id=16501040600 status=302 token=73_Mg4kSb 2026-09-15T04:20:59.595453Z 01E Downloading artifacts from coordinator... ok  correlation_id=de7098d83ef4482fb579d4df4ac87582 id=16501040600 status=302 token=73_Mg4kSb 2026-09-15T04:21:00.208814Z 00O section_end:1789446060:download_artifacts  2026-09-15T04:21:00.209234Z 00O+section_start:1789446060:step_script  2026-09-15T04:21:00.209242Z 00O+Executing "step_script" stage of the job script 2026-09-15T04:21:00.209253Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-san 2026-09-15T04:21:00.210078Z 00O Using docker image sha256:67e6f54dc2c271a8c6d20da9003b4f2f665cf2b84b9714df4b7821d87c228ae3 for registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-san with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-san@sha256:be0450cf11c59f07b7c2cb5f38718a0a86e0f401adb075f74604c57531de943d ... 2026-09-15T04:21:00.444325Z 01O $ cp $(ls -1t bus/build/data.table_*.tar.gz | head -n 1) . 2026-09-15T04:21:00.448473Z 01O $ mkdir -p ~/.R 2026-09-15T04:21:00.449270Z 01O $ Rscript -e 'source(".ci/ci.R"); install.packages(dcf.dependencies("DESCRIPTION", which="all"), repos=file.path("file:", normalizePath("bus/mirror-packages/cran", mustWork=FALSE)), quiet=TRUE)' 2026-09-15T04:21:00.877586Z 01E also installing the dependencies ‘bit’, ‘R.oo’, ‘R.methodsS3’, ‘lattice’, ‘commonmark’, ‘evaluate’, ‘highr’ 2026-09-15T04:21:00.877597Z 01E 2026-09-15T04:23:36.860707Z 01E Updating HTML index of packages in '.Library' 2026-09-15T04:23:36.862091Z 01E Making 'packages.html' ... done 2026-09-15T04:23:36.883484Z 01O $ res1=0; ASAN_OPTIONS=detect_leaks=1 R CMD check --no-manual $(ls -1t data.table_*.tar.gz | head -n 1) || res1=$? # collapsed multi-line command 2026-09-15T04:23:37.813069Z 01O * using log directory ‘/builds/Rdatatable/data.table/data.table.Rcheck’ 2026-09-15T04:23:37.813419Z 01O * using R Under development (unstable) (2026-09-13 r90534) 2026-09-15T04:23:37.813758Z 01O * using platform: x86_64-pc-linux-gnu 2026-09-15T04:23:37.814075Z 01O * R was compiled by 2026-09-15T04:23:37.814281Z 01O gcc (Debian 16.2.0-1) 16.2.0 2026-09-15T04:23:37.814282Z 01O GNU Fortran (Debian 16.2.0-1) 16.2.0 2026-09-15T04:23:37.814632Z 01O * running under: Debian GNU/Linux forky/sid 2026-09-15T04:23:37.814998Z 01O * using session charset: UTF-8 2026-09-15T04:23:37.816140Z 01O * current time: 2026-09-15 04:23:37 UTC 2026-09-15T04:23:39.183226Z 01O * using option ‘--no-manual’ 2026-09-15T04:23:39.183862Z 01O * checking for file ‘data.table/DESCRIPTION’ ... OK 2026-09-15T04:23:39.189617Z 01O * this is package ‘data.table’ version ‘1.18.99’ 2026-09-15T04:23:39.189970Z 01O * package encoding: UTF-8 2026-09-15T04:23:39.190336Z 01O * checking package namespace information ... OK 2026-09-15T04:23:39.216118Z 01O * checking package dependencies ... OK 2026-09-15T04:23:41.078991Z 01O * checking if this is a source package ... OK 2026-09-15T04:23:41.082484Z 01O * checking if there is a namespace ... OK 2026-09-15T04:23:41.086636Z 01O * checking for .dll and .exe files ... OK 2026-09-15T04:23:41.087502Z 01O * checking for hidden files and directories ... OK 2026-09-15T04:23:41.090026Z 01O * checking for portable file names ... OK 2026-09-15T04:23:41.100606Z 01O * checking for sufficient/correct file permissions ... OK 2026-09-15T04:23:41.102731Z 01O * checking whether package ‘data.table’ can be installed ... OK 2026-09-15T04:24:28.875409Z 01O * used C compiler: ‘gcc (Debian 16.2.0-1) 16.2.0’ 2026-09-15T04:24:28.876032Z 01O * checking installed package size ... INFO 2026-09-15T04:24:28.880104Z 01O installed size is 15.8Mb 2026-09-15T04:24:28.881372Z 01O sub-directories of 1Mb or more: 2026-09-15T04:24:28.882491Z 01O doc 1.1Mb 2026-09-15T04:24:28.882493Z 01O libs 9.4Mb 2026-09-15T04:24:28.882494Z 01O po 1.7Mb 2026-09-15T04:24:28.882494Z 01O tests 2.2Mb 2026-09-15T04:24:28.882818Z 01O * checking package directory ... OK 2026-09-15T04:24:28.883551Z 01O * checking ‘build’ directory ... OK 2026-09-15T04:24:28.884950Z 01O * checking DESCRIPTION meta-information ... OK 2026-09-15T04:24:30.438625Z 01O * checking top-level files ... OK 2026-09-15T04:24:30.439972Z 01O * checking for left-over files ... OK 2026-09-15T04:24:30.442817Z 01O * checking index information ... OK 2026-09-15T04:24:30.822596Z 01O * checking package subdirectories ... OK 2026-09-15T04:24:31.653699Z 01O * checking code files for non-ASCII characters ... OK 2026-09-15T04:24:31.769664Z 01O * checking R files for syntax errors ... OK 2026-09-15T04:24:31.972164Z 01O * checking whether the package can be loaded ... OK 2026-09-15T04:24:32.431205Z 01O * checking whether the package can be loaded with stated dependencies ... OK 2026-09-15T04:24:32.803663Z 01O * checking whether the package can be unloaded cleanly ... OK 2026-09-15T04:24:33.164702Z 01O * checking whether the namespace can be loaded with stated dependencies ... OK 2026-09-15T04:24:33.527806Z 01O * checking whether the namespace can be unloaded cleanly ... OK 2026-09-15T04:24:33.975782Z 01O * checking loading without being on the library search path ... OK 2026-09-15T04:24:34.867154Z 01O * checking whether startup messages can be suppressed ... OK 2026-09-15T04:24:35.291713Z 01O * checking dependencies in R code ... OK 2026-09-15T04:24:37.077096Z 01O * checking S3 generic/method consistency ... OK 2026-09-15T04:24:37.850402Z 01O * checking replacement functions ... OK 2026-09-15T04:24:38.270045Z 01O * checking foreign function calls ... OK 2026-09-15T04:24:39.998178Z 01O * checking R code for possible problems ... OK 2026-09-15T04:25:07.244322Z 01O * checking Rd files ... OK 2026-09-15T04:25:08.755248Z 01O * checking Rd metadata ... OK 2026-09-15T04:25:08.849612Z 01O * checking Rd cross-references ... OK 2026-09-15T04:25:09.554550Z 01O * checking for missing documentation entries ... OK 2026-09-15T04:25:10.047571Z 01O * checking for code/documentation mismatches ... OK 2026-09-15T04:25:12.326112Z 01O * checking Rd \usage sections ... OK 2026-09-15T04:25:14.399071Z 01O * checking Rd contents ... OK 2026-09-15T04:25:15.519309Z 01O * checking for unstated dependencies in examples ... OK 2026-09-15T04:25:16.539052Z 01O * checking line endings in shell scripts ... OK 2026-09-15T04:25:16.539881Z 01O * checking line endings in C/C++/Fortran sources/headers ... OK 2026-09-15T04:25:16.570402Z 01O * checking line endings in Makefiles ... OK 2026-09-15T04:25:16.571083Z 01O * checking compilation flags in Makevars ... OK 2026-09-15T04:25:16.671294Z 01O * checking for GNU extensions in Makefiles ... OK 2026-09-15T04:25:16.672490Z 01O * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK 2026-09-15T04:25:16.674336Z 01O * checking use of PKG_*FLAGS in Makefiles ... OK 2026-09-15T04:25:16.688667Z 01O * checking compiled code ... OK 2026-09-15T04:25:18.667074Z 01O * checking installed files from ‘inst/doc’ ... OK 2026-09-15T04:25:19.132246Z 01O * checking files in ‘vignettes’ ... OK 2026-09-15T04:25:19.612894Z 01O * checking examples ... OK 2026-09-15T04:25:25.557659Z 01O * checking for unstated dependencies in ‘tests’ ... OK 2026-09-15T04:25:25.706815Z 01O * checking tests ... 2026-09-15T04:25:25.981342Z 01O Running ‘autoprint.R’ 2026-09-15T04:25:26.499915Z 01O Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK 2026-09-15T04:25:26.509152Z 01O Running ‘froll.R’ 2026-09-15T04:43:08.872372Z 01O Running ‘litedown.R’ 2026-09-15T04:43:09.526873Z 01O Running ‘main.R’ 2026-09-15T04:44:39.221765Z 01O Running ‘mergelist.R’ 2026-09-15T04:44:42.629601Z 01O Running ‘nafill.R’ 2026-09-15T04:44:43.729754Z 01O Running ‘optimize.R’ 2026-09-15T04:44:46.559772Z 01O Running ‘other.R’ 2026-09-15T04:44:47.013063Z 01O Running ‘programming.R’ 2026-09-15T04:44:48.205633Z 01O Running ‘S4.R’ 2026-09-15T04:44:48.889016Z 01O Running ‘self.R’ 2026-09-15T04:44:49.382476Z 01O Running ‘types.R’ 2026-09-15T04:44:49.960595Z 01O OK 2026-09-15T04:44:50.437372Z 01O * checking for unstated dependencies in vignettes ... OK 2026-09-15T04:44:51.075829Z 01O * checking package vignettes ... OK 2026-09-15T04:44:53.051076Z 01O * checking re-building of vignette outputs ... OK 2026-09-15T04:45:44.516725Z 01O * DONE 2026-09-15T04:45:44.517579Z 01E 2026-09-15T04:45:44.517717Z 01O Status: OK 2026-09-15T04:45:44.518017Z 01E 2026-09-15T04:45:44.896313Z 00O section_end:1789447544:step_script  2026-09-15T04:45:44.896764Z 00O+section_start:1789447544:after_script  2026-09-15T04:45:44.896770Z 00O+Running after_script 2026-09-15T04:45:45.114869Z 01O Running after script... 2026-09-15T04:45:45.114894Z 01O $ mkdir -p bus/$CI_JOB_NAME 2026-09-15T04:45:45.115477Z 01O $ echo $CI_JOB_ID > bus/$CI_JOB_NAME/id 2026-09-15T04:45:45.115479Z 01O $ echo $CI_JOB_STATUS > bus/$CI_JOB_NAME/status 2026-09-15T04:45:45.115488Z 01O $ echo $CI_JOB_IMAGE > bus/$CI_JOB_NAME/image 2026-09-15T04:45:45.115494Z 01O $ [ -d data.table.Rcheck ] && mv data.table.Rcheck bus/$CI_JOB_NAME/ 2026-09-15T04:45:45.242104Z 00O section_end:1789447545:after_script  2026-09-15T04:45:45.242904Z 00O+section_start:1789447545:upload_artifacts_on_success  2026-09-15T04:45:45.242910Z 00O+Uploading artifacts for successful job 2026-09-15T04:45:45.499446Z 01O Uploading artifacts... 2026-09-15T04:45:45.534037Z 01E bus/test-lin-dev-gcc-san: found 714 matching artifact files and directories 2026-09-15T04:45:46.818955Z 01E Uploading artifacts as "archive" to coordinator... 201 Created correlation_id=3fbc3f232de84abd8b6750413939c337 id=16501040608 status=201 token=73_Mg4kSb 2026-09-15T04:45:46.946256Z 00O section_end:1789447546:upload_artifacts_on_success  2026-09-15T04:45:46.946706Z 00O+section_start:1789447546:cleanup_file_variables  2026-09-15T04:45:46.946712Z 00O+Cleaning up project directory and file based variables 2026-09-15T04:45:47.332593Z 00O section_end:1789447547:cleanup_file_variables  2026-09-15T04:45:47.357672Z 00O Job succeeded