2026-07-31T04:21:49.071047Z 00O Running with gitlab-runner 19.2.0~pre.1355.g471b878c (471b878c)
2026-07-31T04:21:49.071060Z 00O   on green-3.saas-linux-medium-amd64.runners-manager.gitlab.com/default RGE_tuxoh, system ID: s_f1e189cfc3d4
2026-07-31T04:21:49.071066Z 00O   feature flags: FF_USE_GIT_PROACTIVE_AUTH:true, FF_HASH_CACHE_KEYS:true
2026-07-31T04:21:49.071089Z 00O Resolving secrets
2026-07-31T04:21:49.071221Z 00O section_start:1785471709:prepare_executor

2026-07-31T04:21:49.071225Z 00O+Preparing the "docker+machine" executor
2026-07-31T04:21:49.202099Z 00O Using Docker executor with image registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict ...
2026-07-31T04:21:52.954630Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict
2026-07-31T04:21:52.955141Z 00O Authenticating with credentials from job payload (GitLab Registry)
2026-07-31T04:21:52.955152Z 00O Pulling docker image registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict ...
2026-07-31T04:22:09.842383Z 00O Using docker image sha256:3b5daed41d86bbd7e0861abfbdba9ee22a574ea7bc046b9d1f2cdcea6f803b06 for registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict@sha256:36c6824a6f7d0be3c536328d083a0c6e9440de42580be54aca1f6451cf3ff470 ...
2026-07-31T04:22:09.842486Z 00O section_end:1785471729:prepare_executor

2026-07-31T04:22:09.842585Z 00O+section_start:1785471729:prepare_script

2026-07-31T04:22:09.842591Z 00O+Preparing environment
2026-07-31T04:22:09.843333Z 00O Using effective pull policy of [always] for container sha256:dbecffa60faeaafbb6f5d88c666e0f47e10aef6018e57cf32cc75d5ff20c3df9
2026-07-31T04:22:14.495041Z 01O Running on runner-rgetuxoh-project-3622566-concurrent-0 via runner-rgetuxoh-s-l-m-amd64-1785471267-0ca361a3...
2026-07-31T04:22:14.662673Z 00O section_end:1785471734:prepare_script

2026-07-31T04:22:14.663212Z 00O+section_start:1785471734:get_sources

2026-07-31T04:22:14.663219Z 00O+Getting source from Git repository
2026-07-31T04:22:15.005593Z 01O Gitaly correlation ID: 1fe60179abed48c89288966038483176
2026-07-31T04:22:15.012630Z 01O Fetching changes...
2026-07-31T04:22:15.015936Z 01O Initialized empty Git repository in /builds/Rdatatable/data.table/.git/
2026-07-31T04:22:15.018179Z 01O Created fresh repository.
2026-07-31T04:22:20.842560Z 01O Checking out 7bc8bc13 as detached HEAD (ref is master)...
2026-07-31T04:22:21.025574Z 01O 
2026-07-31T04:22:21.025583Z 01O Skipping Git submodules setup
2026-07-31T04:22:21.025584Z 01O $ git remote set-url origin "${CI_REPOSITORY_URL}" || echo 'Not a git repository; skipping'
2026-07-31T04:22:21.238930Z 00O section_end:1785471741:get_sources

2026-07-31T04:22:21.239628Z 00O+section_start:1785471741:download_artifacts

2026-07-31T04:22:21.239642Z 00O+Downloading artifacts
2026-07-31T04:22:21.613923Z 01O Downloading artifacts for mirror-packages (15637875528)...
2026-07-31T04:22:21.829992Z 01E Direct download from storage.googleapis.com         correlation_id=c32e3f7cf1a942ad9c71862b505c24a8 id=15637875528 status=302 token=71_8t9vby
2026-07-31T04:22:22.472247Z 01E Downloading artifacts from coordinator... ok        correlation_id=c32e3f7cf1a942ad9c71862b505c24a8 id=15637875528 status=302 token=71_8t9vby
2026-07-31T04:22:23.023475Z 01O Downloading artifacts for build (15637875529)...
2026-07-31T04:22:23.224706Z 01E Direct download from storage.googleapis.com         correlation_id=d2ec97ecb1924c099090bdb221dc6b89 id=15637875529 status=302 token=71_8t9vby
2026-07-31T04:22:23.531624Z 01E Downloading artifacts from coordinator... ok        correlation_id=d2ec97ecb1924c099090bdb221dc6b89 id=15637875529 status=302 token=71_8t9vby
2026-07-31T04:22:24.159920Z 00O section_end:1785471744:download_artifacts

2026-07-31T04:22:24.160350Z 00O+section_start:1785471744:step_script

2026-07-31T04:22:24.160357Z 00O+Executing "step_script" stage of the job script
2026-07-31T04:22:24.160371Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict
2026-07-31T04:22:24.161456Z 00O Using docker image sha256:3b5daed41d86bbd7e0861abfbdba9ee22a574ea7bc046b9d1f2cdcea6f803b06 for registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict@sha256:36c6824a6f7d0be3c536328d083a0c6e9440de42580be54aca1f6451cf3ff470 ...
2026-07-31T04:22:24.489614Z 01O $ cp $(ls -1t bus/build/data.table_*.tar.gz | head -n 1) .
2026-07-31T04:22:24.499208Z 01O $ mkdir -p ~/.R
2026-07-31T04:22:24.500640Z 01O $ echo 'CFLAGS=-g -O2 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2' > ~/.R/Makevars
2026-07-31T04:22:24.500749Z 01O $ echo 'CXXFLAGS=-g -O2 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2' >> ~/.R/Makevars
2026-07-31T04:22:24.500889Z 01O $ Rscript -e 'source(".ci/ci.R"); install.packages(dcf.dependencies("DESCRIPTION", which="all"), repos=file.path("file:", normalizePath("bus/mirror-packages/cran", mustWork=FALSE)), quiet=TRUE)'
2026-07-31T04:22:24.824925Z 01E also installing the dependencies ‘bit’, ‘R.oo’, ‘R.methodsS3’, ‘lattice’, ‘commonmark’, ‘evaluate’, ‘highr’
2026-07-31T04:22:24.824935Z 01E 
2026-07-31T04:24:33.244444Z 01E Updating HTML index of packages in '.Library'
2026-07-31T04:24:33.244525Z 01E Making 'packages.html' ... done
2026-07-31T04:24:33.260687Z 01O $ R CMD check --as-cran $(ls -1t data.table_*.tar.gz | head -n 1)
2026-07-31T04:24:34.414223Z 01O * using log directory ‘/builds/Rdatatable/data.table/data.table.Rcheck’
2026-07-31T04:24:34.414417Z 01O * using R Under development (unstable) (2026-07-29 r90317)
2026-07-31T04:24:34.414794Z 01O * using platform: x86_64-pc-linux-gnu
2026-07-31T04:24:34.415060Z 01O * R was compiled by
2026-07-31T04:24:34.415257Z 01O     gcc (Debian 15.3.0-2) 15.3.0
2026-07-31T04:24:34.415258Z 01O     GNU Fortran (Debian 15.3.0-2) 15.3.0
2026-07-31T04:24:34.415604Z 01O * running under: Debian GNU/Linux forky/sid
2026-07-31T04:24:34.415931Z 01O * using session charset: UTF-8
2026-07-31T04:24:34.416669Z 01O * current time: 2026-07-31 04:24:34 UTC
2026-07-31T04:24:36.527760Z 01O * using option ‘--as-cran’
2026-07-31T04:24:36.528194Z 01O * checking for file ‘data.table/DESCRIPTION’ ... OK
2026-07-31T04:24:36.531365Z 01O * this is package ‘data.table’ version ‘1.18.99’
2026-07-31T04:24:36.531696Z 01O * package encoding: UTF-8
2026-07-31T04:24:36.532034Z 01O * checking CRAN incoming feasibility ... OK
2026-07-31T04:24:37.704378Z 01O * checking package namespace information ... OK
2026-07-31T04:24:37.715268Z 01O * checking package dependencies ... OK
2026-07-31T04:24:39.057380Z 01O * checking if this is a source package ... OK
2026-07-31T04:24:39.060614Z 01O * checking if there is a namespace ... OK
2026-07-31T04:24:39.064988Z 01O * checking for .dll and .exe files ... OK
2026-07-31T04:24:39.065628Z 01O * checking for hidden files and directories ... OK
2026-07-31T04:24:39.068672Z 01O * checking for portable file names ... OK
2026-07-31T04:24:39.073428Z 01O * checking for sufficient/correct file permissions ... OK
2026-07-31T04:24:39.078547Z 01O * checking whether package ‘data.table’ can be installed ... [45s/29s] OK
2026-07-31T04:25:08.346032Z 01O * used C compiler: ‘gcc (Debian 15.3.0-2) 15.3.0’
2026-07-31T04:25:08.346479Z 01O * checking installed package size ... INFO
2026-07-31T04:25:08.350513Z 01O   installed size is  8.7Mb
2026-07-31T04:25:08.351452Z 01O   sub-directories of 1Mb or more:
2026-07-31T04:25:08.352114Z 01O     doc     1.1Mb
2026-07-31T04:25:08.352115Z 01O     libs    2.2Mb
2026-07-31T04:25:08.352115Z 01O     po      1.7Mb
2026-07-31T04:25:08.352116Z 01O     tests   2.2Mb
2026-07-31T04:25:08.365783Z 01O * checking package directory ... OK
2026-07-31T04:25:08.366397Z 01O * checking for future file timestamps ... OK
2026-07-31T04:25:08.367207Z 01O * checking ‘build’ directory ... OK
2026-07-31T04:25:08.368478Z 01O * checking DESCRIPTION meta-information ... OK
2026-07-31T04:25:09.811873Z 01O * checking top-level files ... OK
2026-07-31T04:25:11.221261Z 01O * checking for left-over files ... OK
2026-07-31T04:25:11.224387Z 01O * checking index information ... OK
2026-07-31T04:25:11.427368Z 01O * checking package subdirectories ... OK
2026-07-31T04:25:11.918131Z 01O * checking code files for non-ASCII characters ... OK
2026-07-31T04:25:11.973882Z 01O * checking R files for syntax errors ... OK
2026-07-31T04:25:12.062067Z 01O * checking whether the package can be loaded ... OK
2026-07-31T04:25:12.360032Z 01O * checking whether the package can be loaded with stated dependencies ... OK
2026-07-31T04:25:12.569076Z 01O * checking whether the package can be unloaded cleanly ... OK
2026-07-31T04:25:12.780032Z 01O * checking whether the namespace can be loaded with stated dependencies ... OK
2026-07-31T04:25:12.994244Z 01O * checking whether the namespace can be unloaded cleanly ... OK
2026-07-31T04:25:13.298763Z 01O * checking loading without being on the library search path ... OK
2026-07-31T04:25:13.899021Z 01O * checking whether startup messages can be suppressed ... OK
2026-07-31T04:25:14.194404Z 01O * checking use of S3 registration ... OK
2026-07-31T04:25:14.228108Z 01O * checking dependencies in R code ... OK
2026-07-31T04:25:16.004102Z 01O * checking S3 generic/method consistency ... OK
2026-07-31T04:25:16.545903Z 01O * checking replacement functions ... OK
2026-07-31T04:25:16.779770Z 01O * checking foreign function calls ... OK
2026-07-31T04:25:18.907392Z 01O * checking R code for possible problems ... [46s/46s] OK
2026-07-31T04:26:04.573260Z 01O * checking Rd files ... OK
2026-07-31T04:26:06.102400Z 01O * checking Rd metadata ... OK
2026-07-31T04:26:06.152243Z 01O * checking Rd line widths ... OK
2026-07-31T04:26:06.696678Z 01O * checking Rd cross-references ... OK
2026-07-31T04:26:07.827560Z 01O * checking for missing documentation entries ... OK
2026-07-31T04:26:08.209256Z 01O * checking for code/documentation mismatches ... OK
2026-07-31T04:26:09.650988Z 01O * checking Rd \usage sections ... OK
2026-07-31T04:26:10.972472Z 01O * checking Rd contents ... OK
2026-07-31T04:26:11.996556Z 01O * checking for unstated dependencies in examples ... OK
2026-07-31T04:26:12.843901Z 01O * checking line endings in shell scripts ... OK
2026-07-31T04:26:12.844570Z 01O * checking line endings in C/C++/Fortran sources/headers ... OK
2026-07-31T04:26:12.864095Z 01O * checking line endings in Makefiles ... OK
2026-07-31T04:26:12.864757Z 01O * checking compilation flags in Makevars ... OK
2026-07-31T04:26:12.926642Z 01O * checking for GNU extensions in Makefiles ... OK
2026-07-31T04:26:12.927507Z 01O * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
2026-07-31T04:26:12.928901Z 01O * checking use of PKG_*FLAGS in Makefiles ... OK
2026-07-31T04:26:12.933288Z 01O * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
2026-07-31T04:26:12.940160Z 01O * checking pragmas in C/C++ headers and code ... OK
2026-07-31T04:26:12.958831Z 01O * checking compilation flags used ... OK
2026-07-31T04:26:12.960580Z 01O * checking compiled code ... OK
2026-07-31T04:26:13.046647Z 01O * checking installed files from ‘inst/doc’ ... OK
2026-07-31T04:26:13.308246Z 01O * checking files in ‘vignettes’ ... OK
2026-07-31T04:26:14.551478Z 01O * checking examples ... OK
2026-07-31T04:26:22.778972Z 01O * checking examples with --run-donttest ... [10s/10s] OK
2026-07-31T04:26:33.866954Z 01O * checking for unstated dependencies in ‘tests’ ... OK
2026-07-31T04:26:33.952128Z 01O * checking tests ...
2026-07-31T04:26:34.145686Z 01O   Running ‘autoprint.R’
2026-07-31T04:26:34.537238Z 01O   Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
2026-07-31T04:26:34.544244Z 01O   Running ‘froll.R’ [22m/22m]
2026-07-31T04:48:29.290233Z 01O   Running ‘litedown.R’
2026-07-31T04:48:29.763222Z 01O   Running ‘main.R’ [189s/183s]
2026-07-31T04:51:33.162654Z 01O   Running ‘mergelist.R’
2026-07-31T04:51:36.493051Z 01O   Running ‘nafill.R’
2026-07-31T04:51:37.437593Z 01O   Running ‘optimize.R’
2026-07-31T04:51:40.261831Z 01O   Running ‘other.R’
2026-07-31T04:51:40.572294Z 01O   Running ‘programming.R’
2026-07-31T04:51:41.604528Z 01O   Running ‘S4.R’
2026-07-31T04:51:42.125715Z 01O   Running ‘types.R’
2026-07-31T04:51:42.507429Z 01O  [26m/25m] OK
2026-07-31T04:51:42.622629Z 01O * checking for unstated dependencies in vignettes ... OK
2026-07-31T04:51:43.023272Z 01O * checking package vignettes ... OK
2026-07-31T04:51:43.681428Z 01O * checking re-building of vignette outputs ... [35s/35s] OK
2026-07-31T04:52:19.152115Z 01O * checking PDF version of manual ... OK
2026-07-31T04:52:26.690864Z 01O * checking HTML version of manual ... NOTE
2026-07-31T04:52:35.089962Z 01O Skipping checking math rendering: package 'V8' unavailable
2026-07-31T04:52:35.089970Z 01O * checking for non-standard things in the check directory ... OK
2026-07-31T04:52:35.090386Z 01O * checking for detritus in the temp directory ... OK
2026-07-31T04:52:35.091204Z 01O * DONE
2026-07-31T04:52:35.091651Z 01E 
2026-07-31T04:52:35.091823Z 01O Status: 1 NOTE
2026-07-31T04:52:35.092088Z 01E See
2026-07-31T04:52:35.092089Z 01E   ‘/builds/Rdatatable/data.table/data.table.Rcheck/00check.log’
2026-07-31T04:52:35.092090Z 01E for details.
2026-07-31T04:52:35.092258Z 01E 
2026-07-31T04:52:35.111479Z 01O $ (! grep "warning:" data.table.Rcheck/00install.out)
2026-07-31T04:52:35.113419Z 01O $ Rscript -e 'l=tail(readLines("data.table.Rcheck/00check.log"), 1L); notes<-"Status: 1 NOTE"; if (!identical(l, notes)) stop("Last line of ", shQuote("00check.log"), " is not ", shQuote(notes), " (V8 package) but ", shQuote(l)) else q("no")'
2026-07-31T04:52:35.461876Z 00O section_end:1785473555:step_script

2026-07-31T04:52:35.462285Z 00O+section_start:1785473555:after_script

2026-07-31T04:52:35.462290Z 00O+Running after_script
2026-07-31T04:52:35.777001Z 01O Running after script...
2026-07-31T04:52:35.777031Z 01O $ mkdir -p bus/$CI_JOB_NAME
2026-07-31T04:52:35.778113Z 01O $ echo $CI_JOB_ID > bus/$CI_JOB_NAME/id
2026-07-31T04:52:35.778190Z 01O $ echo $CI_JOB_STATUS > bus/$CI_JOB_NAME/status
2026-07-31T04:52:35.778305Z 01O $ echo $CI_JOB_IMAGE > bus/$CI_JOB_NAME/image
2026-07-31T04:52:35.778370Z 01O $ [ -d data.table.Rcheck ] && mv data.table.Rcheck bus/$CI_JOB_NAME/
2026-07-31T04:52:35.928625Z 00O section_end:1785473555:after_script

2026-07-31T04:52:35.929336Z 00O+section_start:1785473555:upload_artifacts_on_success

2026-07-31T04:52:35.929344Z 00O+Uploading artifacts for successful job
2026-07-31T04:52:36.301067Z 01O Uploading artifacts...
2026-07-31T04:52:36.357558Z 01E bus/test-lin-dev-gcc-strict-cran: found 716 matching artifact files and directories 
2026-07-31T04:52:38.569884Z 01E Uploading artifacts as "archive" to coordinator... 201 Created  correlation_id=297d664b78ac47b59866a43433de2a56 id=15637875533 status=201 token=71_8t9vby
2026-07-31T04:52:38.727814Z 00O section_end:1785473558:upload_artifacts_on_success

2026-07-31T04:52:38.727918Z 00O+section_start:1785473558:cleanup_file_variables

2026-07-31T04:52:38.727923Z 00O+Cleaning up project directory and file based variables
2026-07-31T04:52:39.204165Z 00O section_end:1785473559:cleanup_file_variables

2026-07-31T04:52:39.240924Z 00O Job succeeded