2026-10-16T04:20:59.844083Z 00O Running with gitlab-runner 19.5.0~pre.2326.gc76cd792 (c76cd792)
2026-10-16T04:20:59.844103Z 00O   on k8s.saas-linux-medium-amd64.runners-manager.gitlab.com/default j8vTLRhES, system ID: r_2lrRfE1mrRCg
2026-10-16T04:20:59.844106Z 00O   UUID: 01a01aa6-2f91-7d2c-b24d-7e2d2752ac58
2026-10-16T04:20:59.844115Z 00O   feature flags: FF_USE_GIT_PROACTIVE_AUTH:true, FF_HASH_CACHE_KEYS:true, FF_USE_JOB_ROUTER:true, FF_MACHINE_OPTIONS_EXPAND_ENV:true, FF_DOCKER_MACHINE_JSON_OUTPUT:true
2026-10-16T04:20:59.844144Z 00O Resolving secrets
2026-10-16T04:20:59.844289Z 00O section_start:1792124459:prepare_executor

2026-10-16T04:20:59.844293Z 00O+Preparing the "docker+machine" executor
2026-10-16T04:20:59.919591Z 00O Using Docker executor with image registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict ...
2026-10-16T04:20:59.919642Z 00O Using helper image:  registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-c76cd792  (overridden, default would be  registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.5.0 )
2026-10-16T04:20:59.919652Z 00O Using effective pull policy of [always] for container registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-c76cd792
2026-10-16T04:20:59.920374Z 00O Authenticating with credentials from job payload (GitLab Registry)
2026-10-16T04:20:59.920386Z 00O Pulling docker image registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-c76cd792 ...
2026-10-16T04:21:01.339900Z 00O Using docker image sha256:291b835267c62bbfe0ac2d5f77efe9bc330c064f6899dc0b5be396cd23371b5f for registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-c76cd792 with digest registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper@sha256:68ca0940c4c9ae6d9bfaf2789a663ebebc0f5e525b110d5ff3e5bab113a816e0 ...
2026-10-16T04:21:02.966893Z 00O Using helper image:  registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-c76cd792  (overridden, default would be  registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.5.0 )
2026-10-16T04:21:02.966913Z 00O Using effective pull policy of [always] for container registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-c76cd792
2026-10-16T04:21:02.967874Z 00O Using docker image sha256:291b835267c62bbfe0ac2d5f77efe9bc330c064f6899dc0b5be396cd23371b5f for registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-c76cd792 with digest registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper@sha256:68ca0940c4c9ae6d9bfaf2789a663ebebc0f5e525b110d5ff3e5bab113a816e0 ...
2026-10-16T04:21:02.967898Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict
2026-10-16T04:21:02.968535Z 00O Authenticating with credentials from job payload (GitLab Registry)
2026-10-16T04:21:02.968543Z 00O Pulling docker image registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict ...
2026-10-16T04:21:20.286115Z 00O Using docker image sha256:d8b7f54a1310b9f5dcd9bf30be110b92d4ad76e384c954114dac5adf84f562b2 for registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict@sha256:61119da54492e5ad24403a6a13a9aaebeab57e7681e1515ccb343f4e44037f65 ...
2026-10-16T04:21:20.286212Z 00O section_end:1792124480:prepare_executor

2026-10-16T04:21:20.286338Z 00O+section_start:1792124480:prepare_script

2026-10-16T04:21:20.286343Z 00O+Preparing environment
2026-10-16T04:21:20.286384Z 00O Using helper image:  registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-c76cd792  (overridden, default would be  registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-v19.5.0 )
2026-10-16T04:21:20.286397Z 00O Using effective pull policy of [always] for container registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-c76cd792
2026-10-16T04:21:20.287344Z 00O Using docker image sha256:291b835267c62bbfe0ac2d5f77efe9bc330c064f6899dc0b5be396cd23371b5f for registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper:x86_64-c76cd792 with digest registry.gitlab.com/gitlab-org/gitlab-runner/gitlab-runner-helper@sha256:68ca0940c4c9ae6d9bfaf2789a663ebebc0f5e525b110d5ff3e5bab113a816e0 ...
2026-10-16T04:21:20.287363Z 00O Using effective pull policy of [always] for container sha256:291b835267c62bbfe0ac2d5f77efe9bc330c064f6899dc0b5be396cd23371b5f
2026-10-16T04:21:25.437695Z 01O Running on runner-j8vtlrhes-project-3622566-concurrent-0 via runner-j8vtlrhes-s-l-m-amd64-1792124360-2a17e212...
2026-10-16T04:21:25.440394Z 01O Running on CPU: INTEL(R) XEON(R) PLATINUM 8581C CPU @ 2.10GHz (avx, avx2, avx512f)
2026-10-16T04:21:25.586060Z 00O section_end:1792124485:prepare_script

2026-10-16T04:21:25.586497Z 00O+section_start:1792124485:get_sources

2026-10-16T04:21:25.586503Z 00O+Getting source from Git repository
2026-10-16T04:21:25.896325Z 01O Gitaly correlation ID: d44e0db6ad254058bd45939dd3d15cec
2026-10-16T04:21:25.901296Z 01O Fetching changes...
2026-10-16T04:21:25.903940Z 01O Initialized empty Git repository in /builds/Rdatatable/data.table/.git/
2026-10-16T04:21:25.905810Z 01O Created fresh repository.
2026-10-16T04:21:31.524859Z 01O Checking out df59dd63 as detached HEAD (ref is master)...
2026-10-16T04:21:31.701161Z 01O 
2026-10-16T04:21:31.701171Z 01O Skipping Git submodules setup
2026-10-16T04:21:31.701173Z 01O $ git remote set-url origin "${CI_REPOSITORY_URL}" || echo 'Not a git repository; skipping'
2026-10-16T04:21:31.886910Z 00O section_end:1792124491:get_sources

2026-10-16T04:21:31.887471Z 00O+section_start:1792124491:download_artifacts

2026-10-16T04:21:31.887477Z 00O+Downloading artifacts
2026-10-16T04:21:32.216170Z 01O Downloading artifacts for build (17221684172)...
2026-10-16T04:21:32.395592Z 01E Direct download from storage.googleapis.com         correlation_id=9616100bfb764c618be78ad894d63f39 id=17221684172 status=302 token=74_mxNstx
2026-10-16T04:21:32.587309Z 01E Downloading artifacts from coordinator... ok        correlation_id=9616100bfb764c618be78ad894d63f39 id=17221684172 status=302 token=74_mxNstx
2026-10-16T04:21:32.595799Z 01O Downloading artifacts for mirror-packages (17221684171)...
2026-10-16T04:21:32.873036Z 01E Direct download from storage.googleapis.com         correlation_id=e6e71fc457cd4bd4a380d283c6c6c75e id=17221684171 status=302 token=74_mxNstx
2026-10-16T04:21:33.503575Z 01E Downloading artifacts from coordinator... ok        correlation_id=e6e71fc457cd4bd4a380d283c6c6c75e id=17221684171 status=302 token=74_mxNstx
2026-10-16T04:21:34.583690Z 00O section_end:1792124494:download_artifacts

2026-10-16T04:21:34.584077Z 00O+section_start:1792124494:step_script

2026-10-16T04:21:34.584085Z 00O+Executing "step_script" stage of the job script
2026-10-16T04:21:34.584100Z 00O Using effective pull policy of [always] for container registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict
2026-10-16T04:21:34.585303Z 00O Using docker image sha256:d8b7f54a1310b9f5dcd9bf30be110b92d4ad76e384c954114dac5adf84f562b2 for registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict with digest registry.gitlab.com/rdatatable/dockerfiles/r-devel-gcc-strict@sha256:61119da54492e5ad24403a6a13a9aaebeab57e7681e1515ccb343f4e44037f65 ...
2026-10-16T04:21:34.878502Z 01O $ cp $(ls -1t bus/build/data.table_*.tar.gz | head -n 1) .
2026-10-16T04:21:34.884605Z 01O $ mkdir -p ~/.R
2026-10-16T04:21:34.885657Z 01O $ echo 'CFLAGS=-g -O2 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2' > ~/.R/Makevars
2026-10-16T04:21:34.885667Z 01O $ echo 'CXXFLAGS=-g -O2 -flto=auto -fno-common -fopenmp -Wall -Wvla -pedantic -fstack-protector-strong -D_FORTIFY_SOURCE=2' >> ~/.R/Makevars
2026-10-16T04:21:34.885675Z 01O $ Rscript -e 'source(".ci/ci.R"); install.packages(dcf.dependencies("DESCRIPTION", which="all"), repos=file.path("file:", normalizePath("bus/mirror-packages/cran", mustWork=FALSE)), quiet=TRUE)'
2026-10-16T04:21:35.187966Z 01E also installing the dependencies ‘bit’, ‘R.oo’, ‘R.methodsS3’, ‘lattice’, ‘commonmark’, ‘evaluate’, ‘highr’
2026-10-16T04:21:35.187978Z 01E 
2026-10-16T04:23:33.557661Z 01E Updating HTML index of packages in '.Library'
2026-10-16T04:23:33.557994Z 01E Making 'packages.html' ... done
2026-10-16T04:23:33.570417Z 01O $ R CMD check --as-cran $(ls -1t data.table_*.tar.gz | head -n 1)
2026-10-16T04:23:34.676661Z 01O * using log directory ‘/builds/Rdatatable/data.table/data.table.Rcheck’
2026-10-16T04:23:34.676684Z 01O * using R Under development (unstable) (2026-10-14 r90673)
2026-10-16T04:23:34.676912Z 01O * using platform: x86_64-pc-linux-gnu
2026-10-16T04:23:34.677031Z 01O * R was compiled by
2026-10-16T04:23:34.677158Z 01O     gcc (Debian 16.2.0-3) 16.2.0
2026-10-16T04:23:34.677159Z 01O     GNU Fortran (Debian 16.2.0-3) 16.2.0
2026-10-16T04:23:34.678172Z 01O * running under: Debian GNU/Linux forky/sid
2026-10-16T04:23:34.678173Z 01O * using session charset: UTF-8
2026-10-16T04:23:34.678194Z 01O * current time: 2026-10-16 04:23:34 UTC
2026-10-16T04:23:36.696999Z 01O * using option ‘--as-cran’
2026-10-16T04:23:36.697363Z 01O * checking for file ‘data.table/DESCRIPTION’ ... OK
2026-10-16T04:23:36.700585Z 01O * this is package ‘data.table’ version ‘1.18.99’
2026-10-16T04:23:36.700798Z 01O * package encoding: UTF-8
2026-10-16T04:23:36.701043Z 01O * checking CRAN incoming feasibility ... OK
2026-10-16T04:23:37.865052Z 01O * checking package namespace information ... OK
2026-10-16T04:23:37.876831Z 01O * checking package dependencies ... OK
2026-10-16T04:23:39.268512Z 01O * checking if this is a source package ... OK
2026-10-16T04:23:39.270932Z 01O * checking if there is a namespace ... OK
2026-10-16T04:23:39.274581Z 01O * checking for .dll and .exe files ... OK
2026-10-16T04:23:39.275033Z 01O * checking for hidden files and directories ... OK
2026-10-16T04:23:39.276856Z 01O * checking for portable file names ... OK
2026-10-16T04:23:39.281259Z 01O * checking for sufficient/correct file permissions ... OK
2026-10-16T04:23:39.286639Z 01O * checking whether package ‘data.table’ can be installed ... [43s/28s] OK
2026-10-16T04:24:07.036427Z 01O * used C compiler: ‘gcc (Debian 16.2.0-3) 16.2.0’
2026-10-16T04:24:07.036752Z 01O * checking installed package size ... INFO
2026-10-16T04:24:07.040087Z 01O   installed size is  8.8Mb
2026-10-16T04:24:07.040927Z 01O   sub-directories of 1Mb or more:
2026-10-16T04:24:07.041586Z 01O     doc     1.1Mb
2026-10-16T04:24:07.041587Z 01O     libs    2.3Mb
2026-10-16T04:24:07.041588Z 01O     po      1.7Mb
2026-10-16T04:24:07.041589Z 01O     tests   2.2Mb
2026-10-16T04:24:07.127701Z 01O * checking package directory ... OK
2026-10-16T04:24:07.127874Z 01O * checking for future file timestamps ... OK
2026-10-16T04:24:07.128501Z 01O * checking ‘build’ directory ... OK
2026-10-16T04:24:07.129389Z 01O * checking DESCRIPTION meta-information ... OK
2026-10-16T04:24:08.569530Z 01O * checking top-level files ... OK
2026-10-16T04:24:09.856100Z 01O * checking for left-over files ... OK
2026-10-16T04:24:09.858499Z 01O * checking index information ... OK
2026-10-16T04:24:10.050963Z 01O * checking package subdirectories ... OK
2026-10-16T04:24:10.491383Z 01O * checking code files for non-ASCII characters ... OK
2026-10-16T04:24:10.542652Z 01O * checking R files for syntax errors ... OK
2026-10-16T04:24:10.626532Z 01O * checking whether the package can be loaded ... OK
2026-10-16T04:24:10.909658Z 01O * checking whether the package can be loaded with stated dependencies ... OK
2026-10-16T04:24:11.104279Z 01O * checking whether the package can be unloaded cleanly ... OK
2026-10-16T04:24:11.301264Z 01O * checking whether the namespace can be loaded with stated dependencies ... OK
2026-10-16T04:24:11.502409Z 01O * checking whether the namespace can be unloaded cleanly ... OK
2026-10-16T04:24:11.793758Z 01O * checking loading without being on the library search path ... OK
2026-10-16T04:24:12.366364Z 01O * checking whether startup messages can be suppressed ... OK
2026-10-16T04:24:12.650256Z 01O * checking use of S3 registration ... OK
2026-10-16T04:24:12.681189Z 01O * checking dependencies in R code ... OK
2026-10-16T04:24:14.335822Z 01O * checking S3 generic/method consistency ... OK
2026-10-16T04:24:14.856622Z 01O * checking replacement functions ... OK
2026-10-16T04:24:15.078959Z 01O * checking foreign function calls ... OK
2026-10-16T04:24:17.133855Z 01O * checking R code for possible problems ... [41s/41s] OK
2026-10-16T04:24:58.355942Z 01O * checking Rd files ... OK
2026-10-16T04:24:59.783181Z 01O * checking Rd metadata ... OK
2026-10-16T04:24:59.832747Z 01O * checking Rd line widths ... OK
2026-10-16T04:25:00.316927Z 01O * checking Rd cross-references ... OK
2026-10-16T04:25:01.384882Z 01O * checking for missing documentation entries ... OK
2026-10-16T04:25:01.746624Z 01O * checking for code/documentation mismatches ... OK
2026-10-16T04:25:03.088908Z 01O * checking Rd \usage sections ... OK
2026-10-16T04:25:04.327959Z 01O * checking Rd contents ... OK
2026-10-16T04:25:05.197181Z 01O * checking for unstated dependencies in examples ... OK
2026-10-16T04:25:05.935480Z 01O * checking line endings in shell scripts ... OK
2026-10-16T04:25:05.935954Z 01O * checking line endings in C/C++/Fortran sources/headers ... OK
2026-10-16T04:25:05.952656Z 01O * checking line endings in Makefiles ... OK
2026-10-16T04:25:05.953197Z 01O * checking compilation flags in Makevars ... OK
2026-10-16T04:25:06.007801Z 01O * checking for GNU extensions in Makefiles ... OK
2026-10-16T04:25:06.008543Z 01O * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
2026-10-16T04:25:06.009707Z 01O * checking use of PKG_*FLAGS in Makefiles ... OK
2026-10-16T04:25:06.012445Z 01O * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
2026-10-16T04:25:06.017242Z 01O * checking pragmas in C/C++ headers and code ... OK
2026-10-16T04:25:06.035094Z 01O * checking compilation flags used ... OK
2026-10-16T04:25:06.036757Z 01O * checking compiled code ... OK
2026-10-16T04:25:08.124001Z 01O * checking installed files from ‘inst/doc’ ... OK
2026-10-16T04:25:08.360596Z 01O * checking files in ‘vignettes’ ... OK
2026-10-16T04:25:09.512967Z 01O * checking examples ... OK
2026-10-16T04:25:16.570904Z 01O * checking examples with --run-donttest ... OK
2026-10-16T04:25:26.813157Z 01O * checking for unstated dependencies in ‘tests’ ... OK
2026-10-16T04:25:26.892082Z 01O * checking tests ...
2026-10-16T04:25:27.077236Z 01O   Running ‘autoprint.R’
2026-10-16T04:25:27.438065Z 01O   Comparing ‘autoprint.Rout’ to ‘autoprint.Rout.save’ ... OK
2026-10-16T04:25:27.444029Z 01O   Running ‘froll.R’ [20m/19m]
2026-10-16T04:44:56.194804Z 01O   Running ‘litedown.R’
2026-10-16T04:44:56.635600Z 01O   Running ‘main.R’ [149s/144s]
2026-10-16T04:47:20.629958Z 01O   Running ‘mergelist.R’
2026-10-16T04:47:23.742917Z 01O   Running ‘nafill.R’
2026-10-16T04:47:24.630966Z 01O   Running ‘optimize.R’
2026-10-16T04:47:27.254351Z 01O   Running ‘other.R’
2026-10-16T04:47:27.546052Z 01O   Running ‘programming.R’
2026-10-16T04:47:28.491238Z 01O   Running ‘S4.R’
2026-10-16T04:47:28.965160Z 01O   Running ‘self.R’
2026-10-16T04:47:29.288417Z 01O   Running ‘types.R’
2026-10-16T04:47:29.632814Z 01O  [23m/22m] OK
2026-10-16T04:47:29.948954Z 01O * checking for unstated dependencies in vignettes ... OK
2026-10-16T04:47:30.311653Z 01O * checking package vignettes ... OK
2026-10-16T04:47:31.801659Z 01O * checking re-building of vignette outputs ... [34s/34s] OK
2026-10-16T04:48:05.819777Z 01O * checking PDF version of manual ... OK
2026-10-16T04:48:14.339043Z 01O * checking HTML version of manual ... NOTE
2026-10-16T04:48:23.530922Z 01O Skipping checking math rendering: package 'V8' unavailable
2026-10-16T04:48:23.530941Z 01O * checking for non-standard things in the check directory ... OK
2026-10-16T04:48:23.531268Z 01O * checking for detritus in the temp directory ... OK
2026-10-16T04:48:23.531927Z 01O * DONE
2026-10-16T04:48:23.532375Z 01E 
2026-10-16T04:48:23.532396Z 01O Status: 1 NOTE
2026-10-16T04:48:23.532614Z 01E See
2026-10-16T04:48:23.532615Z 01E   ‘/builds/Rdatatable/data.table/data.table.Rcheck/00check.log’
2026-10-16T04:48:23.532617Z 01E for details.
2026-10-16T04:48:23.532762Z 01E 
2026-10-16T04:48:23.545575Z 01O $ (! grep "warning:" data.table.Rcheck/00install.out)
2026-10-16T04:48:23.547018Z 01O $ Rscript -e 'l=tail(readLines("data.table.Rcheck/00check.log"), 1L); notes<-"Status: 1 NOTE"; if (!identical(l, notes)) stop("Last line of ", shQuote("00check.log"), " is not ", shQuote(notes), " (V8 package) but ", shQuote(l)) else q("no")'
2026-10-16T04:48:23.884650Z 00O section_end:1792126103:step_script

2026-10-16T04:48:23.884954Z 00O+section_start:1792126103:after_script

2026-10-16T04:48:23.884960Z 00O+Running after_script
2026-10-16T04:48:24.182582Z 01O Running after script...
2026-10-16T04:48:24.182611Z 01O $ mkdir -p bus/$CI_JOB_NAME
2026-10-16T04:48:24.183296Z 01O $ echo $CI_JOB_ID > bus/$CI_JOB_NAME/id
2026-10-16T04:48:24.183300Z 01O $ echo $CI_JOB_STATUS > bus/$CI_JOB_NAME/status
2026-10-16T04:48:24.183359Z 01O $ echo $CI_JOB_IMAGE > bus/$CI_JOB_NAME/image
2026-10-16T04:48:24.183413Z 01O $ [ -d data.table.Rcheck ] && mv data.table.Rcheck bus/$CI_JOB_NAME/
2026-10-16T04:48:24.384315Z 00O section_end:1792126104:after_script

2026-10-16T04:48:24.384859Z 00O+section_start:1792126104:upload_artifacts_on_success

2026-10-16T04:48:24.384865Z 00O+Uploading artifacts for successful job
2026-10-16T04:48:24.709937Z 01O Uploading artifacts...
2026-10-16T04:48:24.760995Z 01E bus/test-lin-dev-gcc-strict-cran: found 721 matching artifact files and directories 
2026-10-16T04:48:25.890617Z 01E Uploading artifacts as "archive" to coordinator... 201 Created  correlation_id=433d6ab3ad104a9b9ce5b7d048946437 id=17221684176 status=201 token=74_mxNstx
2026-10-16T04:48:26.046335Z 00O section_end:1792126106:upload_artifacts_on_success

2026-10-16T04:48:26.046700Z 00O+section_start:1792126106:cleanup_file_variables

2026-10-16T04:48:26.046706Z 00O+Cleaning up project directory and file based variables
2026-10-16T04:48:26.509068Z 00O section_end:1792126106:cleanup_file_variables

2026-10-16T04:48:26.537736Z 00O Job succeeded